Job Description P31473 Confidence 99.63% Date Thu Jan 5 11:48:01 GMT 2012 Rank 56 Aligned Residues 152 % Identity 13% Template c2chvE_ PDB info PDB header:dna-binding protein Chain: E: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c adpnp complex Resolution 4.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	.	.	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P	L	S	I	Q	A	L	K	D	E	G	R	Y
Query Conservation																						.	.
Alig confidence																						.	.																									.
Template Conservation																																																.
Template Sequence		D	E	V	V	G	Q	D	E	V	I	Q	R	L	K	G	Y	V	E	R	K	N	I	P	H	L	L	F	S	G	P	P	G	T	G	K	T	A	T	A	I	A	L	A	R	D	L	.	F	G	E	N	W	R	D	N	F	I	E	M	N	A	S	D	E	R	G	I	D	V	V	R	H	K	I	K	E	F	A	R	T
Template Known Secondary structure		G	G			S									G	G	G	T	T	T	T											T	T	S	S													.		T	T			T	T	T						T	T	S	T	T	S	T	T	T	S	S									S
Template Predicted Secondary structure																																																.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L
Query Conservation
Alig confidence								.	.	.																												.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation								.	.	.																												.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		A	P	I	G	G	A	.	.	.	P	F	K	I	I	F	L	D	E	A	D	A	L	T	A	D	A	Q	A	A	L	R	R	T	M	E	M	.	.	.	.	.	.	.	.	.	.	Y	S	K	S	C	R	F	I	L	S	C	N	Y	V	S	R	I	I	E	P	I	Q	S	R	C	A	V	.	.	.	.	F	R	F
Template Known Secondary structure				T	T	T		.	.	.									T	G	G	G	S							T	T	G	G	G	T	S	S	.	.	.	.	.	.	.	.	.	.	S	S	S	S								S		G	G	G	S						T	T				.	.	.	.
Template Predicted Secondary structure								.	.	.																												.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		96	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	Q	D	K	A	N	F	R	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	V	P	K	E	A	M	K	K	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions