Job Description P31473 Confidence 99.60% Date Thu Jan 5 11:48:01 GMT 2012 Rank 59 Aligned Residues 152 % Identity 9% Template c1sxjE_ PDB info PDB header:replication Chain: E: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	.	.	.	E	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P	L	S	I	Q	A	L	K	D	E	G	R
Query Conservation																						.	.	.
Alig confidence																						.	.	.																									.
Template Conservation																																																	.
Template Sequence		N	A	L	S	H	N	E	E	L	T	N	F	L	K	S	L	S	D	Q	P	R	D	L	P	H	L	L	L	Y	G	P	N	G	T	G	K	K	T	R	C	M	A	L	L	E	S	I	.	F	G	P	G	V	Y	R	N	V	V	S	S	P	Y	H	L	E	I	T	P	S	N	D	R	I	V	I	Q	E	L	L	K
Template Known Secondary structure		G	G			S										T	T	T	T		T	T										S	T	T	S	S							T						.	S		T	T									S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W
Query Conservation
Alig confidence									.	.	.																												.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation									.	.	.																												.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		E	V	A	Q	M	E	Q	.	.	.	R	Y	K	C	V	I	I	N	E	A	N	S	L	T	K	D	A	Q	A	A	L	R	R	T	M	E	K	.	.	.	.	.	.	.	.	.	.	Y	S	K	N	I	R	L	I	M	V	C	D	S	M	S	P	.	.	.	.	I	I	A	P	I	K	S	Q	C	L	L	I	R
Template Known Secondary structure				T	T	T	T		.	.	.										T	T	S	S															.	.	.	.	.	.	.	.	.	.	S	T	T	T								S		S		S	.	.	.	.	S						T	T	S
Template Predicted Secondary structure									.	.	.																												.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.											.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	V	Q	D	K	A	N	F	R	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	P	A	P	S	D	S	E	I	S	T	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions