Job Description P31473 Confidence 99.58% Date Thu Jan 5 11:48:01 GMT 2012 Rank 64 Aligned Residues 153 % Identity 14% Template c1sxjB_ PDB info PDB header:replication Chain: B: PDB Molecule:activator 1 37 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		K	G	L	Y	E	R	S	H	A	I	R	L	C	L	L	A	A	L	S	G	E	.	.	S	V	F	L	L	G	P	P	G	I	A	K	S	L	I	A	R	R	L	K	F	A	F	Q	N	A	R	A	F	E	Y	L	M	T	R	F	S	T	P	E	E	V	F	G	P	L	S	I	Q	A	L	K	D	E	G	R	Y
Query Conservation																							.	.
Alig confidence																							.	.																								.																				.	.
Template Conservation																																																.																				.	.
Template Sequence		S	D	I	V	G	N	K	E	T	I	D	R	L	Q	Q	I	A	K	D	G	N	M	P	H	M	I	I	S	G	M	P	G	I	G	K	T	T	S	V	H	C	L	A	H	E	L	.	L	G	R	S	Y	A	D	G	V	L	E	L	N	A	S	D	D	R	G	.	.	I	D	V	V	R	N	Q	I	K	H	F	A
Template Known Secondary structure		G	G			S		T												S											S	T	T	S	S													.		G	G	G										T	T	S			S	.	.						T
Template Predicted Secondary structure																																																.																				.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	T	S	G	Y	L	P	E	A	E	I	V	F	L	D	E	I	W	K	A	G	P	A	I	L	N	T	L	L	T	A	I	N	E	R	Q	F	R	N	G	A	H	V	E	K	I	P	M	R	L	L	V	A	A	S	N	E	L	P	E	A	D	S	S	L	E	A	L	Y	D	R	M	L	I	R	L	W	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		Q	K	K	L	H	L	P	P	G	K	H	K	I	V	I	L	D	E	A	D	S	M	T	A	G	A	Q	Q	A	L	R	R	T	M	E	L	.	.	.	.	.	.	.	.	.	.	Y	S	N	S	T	R	F	A	F	A	C	N	Q	.	.	.	.	S	N	K	I	I	E	P	L	Q	S	Q	C	A	I	L	R	Y
Template Known Secondary structure									T	T									S	G	G	G	S							T	T							.	.	.	.	.	.	.	.	.	.	T	T	T	T								S		.	.	.	.	G	G	G	S						T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	V	Q	D	K	A	N	F	R	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	L	S	D	E	D	V	L	K	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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