 |
Job Description | P76446 | Confidence | 52.45% | Date | Thu Jan 5 12:23:01 GMT 2012 |
Rank | 258 | Aligned Residues | 98 |
% Identity | 11% | Template | d1qpoa1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.40 |
|
 |
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | Q | L | F | A | W | L | H | S | V | G | V | E | I | A | I | D | D | F | G | T | G | H | S | A | L | I | Y | L | E | R | F | T | L | D | Y | L | K | I | D | R | G | F | I | N | A | I | G | T | E | T | I | T | S | P | V | L | D | A | V | L | T | L | A | K | R | L | N | M | L | T | V | A | E | G | V | E | T | P |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |
Template Sequence |   |
V | V | D | A | L | R | A | V | R | N | A | A | P | D | L | P | C | E | V | E | V | D | S | L | E | Q | L | D | A | V | L | P | E | K | P | E | L | I | L | L | D | N | F | A | V | W | Q | T | Q | T | A | V | Q | . |
. |
. |
. |
. |
. |
. |
. |
R | R | D | S | R | A | P | T | V | M | L | E | S | S | G | G | L | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T |
|  |  |  |  |  | S | S |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
479 | 480 | . | . | . | . | . | . | . | . | . | 490 | |
. | . | . | . | . | . | . | . | . | 500 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |
|
|  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | A | R | W | L | S | E | R | G | V | N | . |
F | M | Q | G | Y | W | I | S | R | P | L | P | L | D |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   | . |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
Q | T | A | A | T | Y | A | E | T | G | V | D | Y | L | A | V | G | A | L | T | H | S | V | R | V | L | D |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  | T | T |
| S |  |  |  |
| G | G | G | T | S | S |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|