Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence45.26%DateThu Jan 5 12:23:01 GMT 2012
Rank286Aligned Residues168
% Identity11%Templated1d3ga_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350........ .360.........370.........380.........390.........400.........410
Predicted Secondary structure 






......












Query SS confidence 





















. . . . . .



















































Query Sequence  RDAAELEKVLPVGVKFGINIAP. . . . . . DHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVG
Query Conservation    
            
 



 ......  
        
   
         
 


 
            
  
   
Alig confidence 





















......





















.




























Template Conservation 
           

 



 


                    
  
   .   

 


 
          
      
Template Sequence  DYAEGVRVLGPLADYLVVNVSSPNTAGLGKAELRRLLTKVLQERDGLRRV. HRPAVLVKIAPDLTSQDKEDIASVVKELG
Template Known Secondary structure  GGG
SS

TTSTT

TS
GG.G


S


T
Template Predicted Secondary structure 























.










Template SS confidence 















































































   194.....200.........210.........220.........230.........240... ......250.........260.........270..
 
   411........420.........430.........440.........450.........460...... ...470.... .....480.......
Predicted Secondary structure 




















..

.



Query SS confidence 























































. .







.












Query Sequence  VEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRL. . NMLTVAEG. VETPEQARWLSER
Query Conservation    
 




     
  
  
  
 



   
               
   
  
.. 
 




.

   
   
   
Alig confidence 

.







.......





































..







.












Template Conservation   
.

   

 .......               

 

       
  
  
       



  


    

   
  
Template Sequence  ID. GLIVTNTT. . . . . . . VSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRA
Template Known Secondary structure 

.


B.......S


TT


TTTTSSSGGGTTT
S
SS

S
Template Predicted Secondary structure 

.


.......






























Template SS confidence 















































































   277. .280...... ...290.........300.........310.........320.........330.........340........
 
   488.490... ......500.........510...
Predicted Secondary structure 


...









Query SS confidence 





. . .



















Query Sequence  GVNFMQ. . . GYWISRPLPLDDFVRWLKKP
Query Conservation 
    
...
     
         
   
Alig confidence 





...



















Template Conservation 


 
 
 
     

     
   
   
Template Sequence  GASLVQLYTALTFWGPPVVGKVKRELEAL
Template Known Secondary structure  T
SS
T
Template Predicted Secondary structure 





Template SS confidence 




























   349350.........360.........370.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions