Job Description P76446 Confidence 100.00% Date Thu Jan 5 12:23:01 GMT 2012 Rank 2 Aligned Residues 352 % Identity 18% Template c3gfzB_ PDB info PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex Resolution 2.05 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		K	K	T	F	C	S	S	A	T	G	E	M	D	I	P	L	N	E	L	I	P	A	L	D	I	N	K	N	V	D	M	A	I	L	P	G	T	P	M	V	P	N	K	P	A	I	V	I	W	Y	R	N	P	.	.	.	.	.	L	L	K	N	S	G	V	F	A	A	L	N	L	N	L	T	P	S	L	F	Y	S
Query Conservation																																																							.	.	.	.	.
Alig confidence																																			.	.																			.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		D	A	L	V	H	R	A	S	S	K	N	L	P	L	G	I	T	G	I	L	L	F	N	G	L	Q	F	F	Q	V	L	E	G	.	.	T	E	E	A	L	E	S	L	F	S	E	I	Q	S	D	P	R	H	R	D	V	V	E	L	M	R	D	Y	S	A	Y	R	R	F	H	G	T	G	M	R	I	L	D	L	R
Template Known Secondary structure																T									S	S									.	.														T		T	T													S	S		S			S	S	S						G	G
Template Predicted Secondary structure																																			.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	Q	E	D	Y	D	G	V	A	L	I	I	G	N	T	A	L	S	T	F	S	S	R	L	M	N	V	N	E	L	T	D	M	P	V	R	E	T	K	I	A	G	I	P	L	T	V	R	L	Y	A	D	D	W	T	W	N	D	V	W	Y	A	F	L	L	G	G	M	S	G	T	V	V	G	L	L	C	Y	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		L	F	E	T	D	G	A	L	E	E	I	L	R	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	V	T	E	P	V	N	D	R	M	F	R	L	L	S	A	F	I	A	D	G	G	R	Y	C	L	P	E	P	L	Q	P	S	.	.	.	.
Template Known Secondary structure		G			T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S		G	G	G	S													G	G	G	G				G	G	G		G	G	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.																											.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		L	M	S	V	R	M	R	P	G	R	E	I	M	T	A	I	K	R	E	Q	F	Y	V	A	Y	Q	P	V	V	D	T	Q	A	L	R	V	T	G	L	E	V	L	L	R	W	R	H	P	V	A	.	G	E	I	P	P	D	A	F	I	N	F	A	E	S	Q	K	M	I	V	P	L	T	Q	H	L	F	E	L	I
Query Conservation																																																				.
Alig confidence		.	.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	W	M	M	M	A	P	Q	H	L	P	G	Q	P	C	Q	F	A	L	Q	A	I	V	E	P	A	K	K	R	V	S	S	F	E	A	L	I	R	S	P	T	G	G	S	P	V	E	M	F	A	A	I	A	A	E	D	R	Y	R	F	D	L	E	S	K	A	Y	A	F	A	L	A	G	Q
Template Known Secondary structure		.	.	.	.	.	.	G										T	T	S	S											T	T	T	T												T	T	S									T	S		G	G	G								T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																												.																																						.
Query SS confidence																												.																																						.
Query Sequence		A	R	D	A	A	E	L	E	K	V	L	P	V	G	V	K	F	G	I	N	I	A	P	D	H	L	.	H	S	E	S	F	K	A	D	I	Q	K	L	L	T	S	L	P	A	H	H	F	Q	I	V	L	E	I	T	E	R	D	M	L	K	E	Q	E	.	A	T	Q	L	F	A	W	L	H	S	V	G	V	E	I
Query Conservation																												.																																						.
Alig confidence			.	.	.	.	.	.	.	.	.																	.																																						.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	P	L	G	K	H	Q	L	A	I	N	L	L	P	G	S	L	Y	H	H	P	D	A	V	G	W	L	M	D	S	L	L	A	A	G	L	R	P	D	Q	V	L	I	E	V	T	E	T	E	V	I	T	C	F	D	Q	F	R	K	V	L	K	A	L	R	V	A	G	M	K	L
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	T			S														S	S	S	S												T	T			G	G	G												T	T															T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		229										230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	D	D	F	G	T	G	H	S	A	L	I	Y	L	E	R	F	T	L	D	Y	L	K	I	D	R	G	F	I	N	A	I	G	T	E	T	I	T	S	P	V	L	D	A	V	L	T	L	A	K	R	L	N	M	L	T	V	A	E	G	V	E	T	P	E	Q	A	R	W	L	S	E	R	G	V	N	F	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	D	D	F	G	A	G	Y	S	G	L	S	L	L	T	R	F	Q	P	D	K	I	K	V	D	A	E	L	V	R	D	I	H	I	S	G	T	K	Q	A	I	V	A	S	V	V	R	C	C	E	D	L	G	I	T	V	V	A	E	G	V	E	T	L	E	E	W	C	W	L	Q	S	V	G	I	R	L	F	Q
Template Known Secondary structure							T	S	S	S			S	T								S										T	T	G	G	G	B																		T										S										T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		494	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	W	I	S	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	L	F	S	R	P
Template Known Secondary structure		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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