Job Description P76446 Confidence 81.28% Date Thu Jan 5 12:23:01 GMT 2012 Rank 127 Aligned Residues 106 % Identity 15% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		395	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		K	E	Q	E	A	T	Q	L	F	.	A	W	L	H	S	V	G	V	E	I	A	I	D	D	F	G	T	G	H	S	A	L	I	Y	L	E	R	F	T	L	D	Y	L	K	I	D	R	G	F	I	N	A	I	G	T	E	T	I	T	S	P	V	L	D	A	V	L	T	L	A	K	R	L	N	M	L	T	V	A	E
Query Conservation											.
Alig confidence											.													.	.																							.	.	.	.	.																									.
Template Conservation																								.	.																							.	.	.	.	.																									.
Template Sequence		D	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	T	.	.	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	.	.	.	.	.	V	W	X	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	.	I	V	I	T
Template Known Secondary structure		S															T	T						.	.		S	S											S			S						.	.	.	.	.	S			T	T			T	T	T										T	T				.
Template Predicted Secondary structure																								.	.																							.	.	.	.	.																									.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	P	E	Q	A	R	W	L	S	E	R	G	V	N	F	M	Q	G	Y	W	I	S	R	P	L	P	L	D	D	F	V	R	W	L	K	K
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		G	H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	.	.	.	.	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K	H
Template Known Secondary structure			S	S												T				.	.	.	.				S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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