Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence91.13%DateThu Jan 5 12:23:01 GMT 2012
Rank60Aligned Residues107
% Identity11%Templatec3c3mA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator receiver protein; PDBTitle: crystal structure of the n-terminal domain of response regulator2 receiver protein from methanoculleus marisnigri jr1
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400... ......410.........420.........430.........440.........450.........460.........470..
Predicted Secondary structure 

.
























.
Query SS confidence 








.




































































.
Query Sequence  KEQEATQLF. AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVA.
Query Conservation          
.  
   
  
 




     
  
  
  
 



   
               
   
  
 
 


.
Alig confidence 








.











..





















.....



























.
Template Conservation 
       
   
   
  
  ..
     
         
 

 
.....       
      

         

  
Template Sequence  DSPXIVDVFVTXLERGGYRPIT. . AFSGEECLEALNATPPDLVLLD. . . . . IXXEPXDGWETLERIKTDPATRDIPVLXL
Template Known Secondary structure  S
TT
..SSS

S.....S

SSS
STTTTTS
Template Predicted Secondary structure 




..









.....











Template SS confidence 















































































   10.........20.........30. ........40.........50... ......60.........70.........80..
 
   473......480.........490.........500.........510..
Predicted Secondary structure 















Query SS confidence 







































Query Sequence  EGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK
Query Conservation 



   
   
   
    

     
         
  
Alig confidence 


















....
















Template Conservation 
              
   .... 
 

     
   
  
Template Sequence  TAKPLTPEEANEYGSYIED. . . . YILKPTTHHQLYEAIEH
Template Known Secondary structure  SS


TTTT
S....


Template Predicted Secondary structure 








....



Template SS confidence 







































   83......90.........100. ........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions