 |
Job Description | P76446 | Confidence | 84.60% | Date | Thu Jan 5 12:23:01 GMT 2012 |
Rank | 102 | Aligned Residues | 111 |
% Identity | 17% | Template | c2yw3E_ |
PDB info |
PDB header:lyase | Chain: E: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- |
PDBTitle: crystal structure analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-2 deydro-3-deoxyphosphogluconate aldolase from tthb1
|
Resolution | 1.67 Å |
|
 |
  |   |
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | E | I | T | E | R | D | M | L | K | E | Q | E | A | T | Q | L | F | A | W | L | H | S | V | G | V | E | I | A | I | D | D | F | G | T | G | H | S | A | L | I | Y | L | E | R | F | T | L | D | Y | L | K | I | D | R | G | F | I | N | A | I | G | T | E | T | I | T | S | P | V | L | D | A | V | L | T | L | A | K |
Query Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
| . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
| . |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
Template Sequence |   |
A | L | E | I | T | L | R | . |
. |
. |
. |
T | E | K | G | L | E | A | L | K | A | L | R | K | S | G | L | L | L | G | A | G | T | V | . |
R | S | P | K | E | A | E | A | A | L | E | A | G | A | A | F | L | V | S | P | G | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | E | V | A | A | L | A | Q |
Template Known Secondary structure |   |
 |  |  |  |
|
| S | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |
|
|
| . |
| S |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | |
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . |
  |
  |   |
465 | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | N | M | L | T | V | A | E | G | V | E | T | P | E | Q | A | R | W | L | S | E | R | G | V | N | F | M | Q | G | Y | W | I | S | R | P | L | P | L | D | D | F | V | R | W | L | K | K | P | Y | T | P |
Query Conservation |   |
  |
|   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   | . |
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|   |
| . |
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
Template Sequence |   |
A | R | G | V | P | Y | L | . |
P | G | V | L | T | P | T | E | V | E | R | A | L | A | L | G | L | S | A | L | . |
K | F | F | P | A | E | P | F | Q | G | V | R | V | L | R | A | Y | A | E | V | F | P | E |
Template Known Secondary structure |   |
 |  | T |
|
|  |  | . |  |  |  |
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  | . |  |  |
| S | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|