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Job DescriptionP76446
Confidence100.00%DateThu Jan 5 12:23:01 GMT 2012
Rank8Aligned Residues236
% Identity28%Templatec2r6oB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative diguanylate cyclase/phosphodiesterase (ggdef & eal PDBTitle: crystal structure of putative diguanylate cyclase/phosphodiesterase2 from thiobacillus denitrificans
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  RPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAEL
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Template Sequence  TLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDDTGLIVALSDWVLEA. . . . . . . . . . . . . CCTQLRAWQQQ
Template Known Secondary structure  TT
TTTT


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   490.........500.........510.........520.........530.........540..... ....550......
 
   343......350.........360.........370.........380.........390...... ...400.........410.........420.
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Query Sequence  EKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKE. QEATQLFAWLHSVGVEIAIDDFGTG
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Template Sequence  GRA. ADDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVXLVXTDEVRTCLDALRARGVRLALDDFGTG
Template Known Secondary structure  T
S.
TT


GGGGSTT


GGGGGGGGG

TT
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   573.. ....580.........590.........600.........610.........620.........630.........640.........650.
 
   422.......430.........440.........450.........460.........470.........480.........490.........500.
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Query Sequence  HSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPL
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Template Sequence  YSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGXEVVAEGIETAQQYAFLRDRGCEFGQGNLXSTPQ
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TTTTT
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   652.......660.........670.........680.........690.........700.........710.........720.........730.
 
   502.......510..
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Query Sequence  PLDDFVRWLKK
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Template Sequence  AADAFASLLDR
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   732.......740..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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