Job Description P76446 Confidence 83.32% Date Thu Jan 5 12:23:01 GMT 2012 Rank 111 Aligned Residues 105 % Identity 11% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		395	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	E	Q	E	A	T	Q	L	F	A	W	.	L	H	S	V	G	V	E	I	A	I	D	D	F	G	T	G	H	S	A	L	I	Y	L	E	R	F	T	L	D	Y	L	K	I	D	R	G	F	I	N	A	I	G	T	E	T	I	T	S	P	V	L	D	A	V	L	T	L	A	K	R	L	N	M	L	T	V	A	E
Query Conservation													.
Alig confidence													.											.	.																							.	.	.	.	.																		.	.
Template Conservation																								.	.																							.	.	.	.	.																		.	.
Template Sequence		G	D	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	I	D	L	.	.	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	.	.	.	.	.	I	I	L	S	D	G	D	G	W	T	L	C	K	K	I	R	N	.	.	V	T	T	C	P	I	V	Y	X	T
Template Known Secondary structure		S															T	T						.	.			S										T				S						.	.	.	.	.	S			T	T													.	.				S
Template Predicted Secondary structure																								.	.																							.	.	.	.	.																		.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	T	P	E	Q	A	R	W	L	S	E	R	G	V	N	F	M	Q	G	Y	W	I	S	R	P	L	P	L	D	D	F	V	R	W	L	K	K
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		Y	I	N	E	D	Q	S	I	L	N	A	L	N	S	G	G	D	D	.	.	.	.	Y	L	I	K	P	L	N	L	E	I	L	Y	A	K	V	K	A
Template Known Secondary structure		S													T	T		S		.	.	.	.				S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions