Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence91.17%DateThu Jan 5 12:23:01 GMT 2012
Rank59Aligned Residues106
% Identity11%Templatec2qr3A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:two-component system response regulator; PDBTitle: crystal structure of the n-terminal signal receiver domain of two-2 component system response regulator from bacteroides fragilis
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400... ......410.........420.........430.........440.........450.........460.........470...
Predicted Secondary structure 

.
























Query SS confidence 








.





































































Query Sequence  KEQEATQLF. AWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAE
Query Conservation          
.  
   
  
 




     
  
  
  
 



   
               
   
  
 
 



Alig confidence 








.











..
























.....



















.




Template Conservation 
       
   
   
  
  ..
     
   
     
 

 
  
.....    
               .

  
Template Sequence  DNKGVLTAVQLLLKNHFSKVIT. . LSSPVSLSTVLREENPEVVLLDMNF. . . . . TSNEGLFWLHEIKRQYRDLP. VVLFT
Template Known Secondary structure  S
TTTSS..

S
TTT.....T



TT

.
Template Predicted Secondary structure 




..













.....









.




Template SS confidence 















































































   910.........20.........30 .........40.........50..... ....60.........70..... ....80
 
   474.....480.........490.........500.........510..
Predicted Secondary structure 















Query SS confidence 






































Query Sequence  GVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK
Query Conservation 


   
   
   
    

     
         
  
Alig confidence 















....


















Template Conservation            
   

....  

 

     
   
  
Template Sequence  AYADIDLAVRGIKEGA. . . . SDFVVKPWDNQKLLETLLN
Template Known Secondary structure  GGGTT
....
S

Template Predicted Secondary structure 






....




Template SS confidence 






































   86...90.........100. ........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions