Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence73.61%DateThu Jan 5 12:23:01 GMT 2012
Rank179Aligned Residues51
% Identity8%Templatec2qpuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   425....430.........440.. ...... .450.........460.........470.....
Predicted Secondary structure 



............




.




Query SS confidence 

















. . . . . . . . . . . .





.


























Query Sequence  LIYLERFTLDYLKIDRGF. . . . . . . . . . . . INAIGT. ETITSPVLDAVLTLAKRLNMLTVAEGV
Query Conservation 
  
  
  
 



   ............
     .          
   
  
 
 





Alig confidence 

















............





.


























Template Conservation 



  


 



 

      


   

  

    

  


 

  

  

 



 
Template Sequence  VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV
Template Known Secondary structure  TT




S
BSSTTS
SB

TT
GGG
SS

TT

Template Predicted Secondary structure 






























Template SS confidence 































































   27..30.........40.........50.........60.........70.........80.........90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions