Job Description P76446 Confidence 20.34% Date Thu Jan 5 12:23:01 GMT 2012 Rank 448 Aligned Residues 155 % Identity 12% Template c1ydyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of periplasmic glycerophosphodiester2 phosphodiesterase from escherichia coli Resolution 1.70 Å

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		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.																			.	.
Query SS confidence																																.	.	.																			.	.
Query Sequence		F	E	L	I	A	R	D	A	A	E	L	E	K	V	L	P	V	G	V	K	F	G	I	N	I	A	P	D	H	L	.	.	.	H	S	E	S	F	K	A	D	I	Q	K	L	L	T	S	L	P	A	.	.	H	H	F	Q	I	V	L	E	I	T	E	R	D	M	L	K	E	Q	E	A	T	Q	L	F	A	W	L
Query Conservation																																.	.	.																			.	.
Alig confidence																																.	.	.																			.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		F	E	E	E	I	E	F	V	Q	G	L	N	H	S	T	G	K	N	I	G	I	Y	P	E	I	K	A	P	W	F	H	H	Q	E	G	K	D	I	A	A	K	T	L	E	V	L	K	K	Y	G	Y	T	G	K	D	D	K	V	Y	L	Q	C	F	D	A	D	.	.	.	.	.	.	.	.	.	E	L	K	R	I
Template Known Secondary structure																	S																		T	T														T	T			S	T	T	S	S	B					S				.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.
		407	.	.																														410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	E	I	A	I	D	D	F	G	T	G	H	S	A	L	I	Y	L	E	R	F	T	L	D	Y	L	K	I	D	R	G	F	I	N	A	I	G	T	E	T	I	T	S	P	V	L	D
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation																																																																						.
Template Sequence		K	N	E	L	E	P	K	M	G	M	E	L	N	L	V	Q	L	I	A	Y	T	D	W	N	E	T	Q	Q	K	Q	P	D	G	S	W	V	N	Y	N	Y	D	W	M	F	K	P	G	A	M	K	Q	V	A	E	Y	A	D	G	I	G	P	D	Y	H	M	L	I	E	.	E	T	S	Q	P	G	N	I	K	L	T
Template Known Secondary structure				T						T												G	G	G								T	T	S								G	G	G	G	S	T	T						T	T	T		S					B	G	G	G	T	B		.	T	T		B	T	T	B			B
Template Predicted Secondary structure																																																																						.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.												.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	L	T	L	A	K	R	L	N	M	L	T	V	A	E	G	V	E	T	P	E	Q	A	R	W	.	.	.	.	.	.	.	.	.	.	.	L	S	E	R	G	V	N	F	M	Q	G	Y	W
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	M	V	Q	D	A	Q	Q	N	K	L	V	V	H	P	Y	T	V	R	S	D	K	L	P	E	Y	T	P	D	V	N	Q	L	Y	D	A	L	Y	N	K	A	G	V	N	G	L	F	T	D	F
Template Known Secondary structure		S								T	T						B		B		T	T	S			T	T		S	S										T	T	S			S					S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions