Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence78.96%DateThu Jan 5 12:23:01 GMT 2012
Rank146Aligned Residues67
% Identity21%Templatec1jgiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of the active site mutant glu328gln of2 amylosucrase from neisseria polysaccharea in complex with3 the natural substrate sucrose
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   409410.........420..... ....430.........440.... .....450.........460.........
Predicted Secondary structure 











....




...............







Query SS confidence 
















. . . .


















. . . . . . . . . . . . . . .
























Query Sequence  VGVEIAIDDFGTGHSAL. . . . IYLERFTLDYLKIDRGFIN. . . . . . . . . . . . . . . AIGTETITSPVLDAVLTLAKRLNML
Query Conservation   
  
 




     
....  
  
  
 



   
 ...............              
   
  
 
 
Alig confidence 
















....


















...............
























Template Conservation             


 

  




  


  
 
 

          

   

  


  

 



 

   
  

 
Template Sequence  VGGVCYVDLFAGDLKGLKDKIPYFQELGLTYLYLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGIS
Template Known Secondary structure 

SSTT
S


B


SS
STTTTS
S
SSSB
TTT

TT
Template Predicted Secondary structure 









































Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170........
 
   470.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  TVAEGV
Query Conservation 





Alig confidence 





Template Conservation 



 
Template Sequence  AVVDFI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   179180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions