Return to main results Retrieve Phyre Job Id

Job DescriptionP76446
Confidence21.32%DateThu Jan 5 12:23:01 GMT 2012
Rank440Aligned Residues140
% Identity10%Templatec1e1cA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:methylmalonyl-coa mutase alpha chain; PDBTitle: methylmalonyl-coa mutase h244a mutant
Resolution2.62 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   364.....370.........380.........390.........400.........410..... ....420.........430.........440..
Predicted Secondary structure 











.












Query SS confidence 



















































.


























Query Sequence  ESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAI. DDFGTGHSALIYLERFTLDYLKIDRGF
Query Conservation        
   
         
 


 
            
  
   
  
 
.



     
  
  
  
 



   
Alig confidence 
























..
























.























...
Template Conservation 
 

   
      
 

 



 
..
      


 

  
   

 
     
 
 

 
 

  


 




...
Template Sequence  EEARELVEEFEQAEGRRPRILLAKM. . GQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADVHVVGVS. . .
Template Known Secondary structure  SS


B..TT



TT


TTB
TT
S...
Template Predicted Secondary structure 





..


















...
Template SS confidence 















































































   581........590.........600..... ....610.........620.........630.........640.........650.....
 
   443......450.........460...... ...470.........480.........490.........500.........510..
Predicted Secondary structure 






...

















Query SS confidence 























. . .













































Query Sequence  INAIGTETITSPVLDAVLTLAKRL. . . NMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKK
Query Conservation 
               
   
  
... 
 






   
   
   
    

     
         
  
Alig confidence  ....



















...













































Template Conservation  ....


  
 
  
 
   
   
     
  

  
      
  


      
                
Template Sequence  . . . . SLAGGHLTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYTPGTVIPESAISLVKKLRA
Template Known Secondary structure  ....
SS
TT
TTSS

GGGTT
TT

Template Predicted Secondary structure  ....

























Template SS confidence 








































































   656...660.........670.........680.........690.........700.........710.........720....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions