Return to main results Retrieve Phyre Job Id

Job DescriptionP76520
Confidence32.84%DateThu Jan 5 12:24:00 GMT 2012
Rank15Aligned Residues132
% Identity18%Templated1hz4a_
SCOP infoalpha-alpha superhelix TPR-like Transcription factor MalT domain III
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.. .......90.........100...
Predicted Secondary structure 


.........................





Query SS confidence 

































. . . . . . . . . . . . . . . . . . . . . . . . .




















Query Sequence  ISEQGLYAMRDVQVARLALFHGDPEKAKELTNEA. . . . . . . . . . . . . . . . . . . . . . . . . SALLSDDSTEWAKFAKPGKKT
Query Conservation 

  
  
  

  

 

  
    

  
  
.........................   

 
  
           
Alig confidence 

































.........................




















Template Conservation 
      

   
 
      
    
      

   
         
   

      
    
      
       
Template Sequence  IREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH
Template Known Secondary structure  TT
T

TT
T
T
Template Predicted Secondary structure 














Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLD
Query Conservation         



    
 
    
  
 


  

  

 

   
   

 
 


      



 
   
  
  

 
Alig confidence 



...................
























































Template Conservation      ...................        
            
      
                     
      
Template Sequence  DVWH. . . . . . . . . . . . . . . . . . . YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA
Template Known Secondary structure  T
...................TT
TT
TTST
Template Predicted Secondary structure  ...................







Template SS confidence 















































































   85... .90.........100.........110.........120.........130.........140.....
 
   184.....190.........
Predicted Secondary structure 


Query SS confidence 















Query Sequence  KKQYYEANLALKGAED
Query Conservation   

  

  

  
 
Alig confidence 















Template Conservation   
    
         
Template Sequence  WARLDEAEASARSGIE
Template Known Secondary structure  TT
Template Predicted Secondary structure 




Template SS confidence 















   146...150.........160.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions