Return to main results Retrieve Phyre Job Id

Job DescriptionP76520
Confidence7.98%DateThu Jan 5 12:24:00 GMT 2012
Rank38Aligned Residues98
% Identity15%Templatec3pe3D_
PDB info PDB header:transferaseChain: D: PDB Molecule:udp-n-acetylglucosamine--peptide n- PDBTitle: structure of human o-glcnac transferase and its complex with a peptide2 substrate
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110.........120.........130....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  YAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIK
Query Conservation   
  

  

 

  
    

  
  
   

 
  
                  



    
 
    
  
 


 
Alig confidence 









































......................................
Template Conservation   
 
   

      
    
      

   
    
   
......................................
Template Sequence  HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

TT
......................................
Template Predicted Secondary structure 







......................................
Template SS confidence 















































































   316...320.........330.........340.........350.......
 
   135....140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 











Query SS confidence 
































































Query Sequence  IANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAED
Query Conservation   

  

 

   
   

 
 


      



 
   
  
  

  

  

  

  
 
Alig confidence  .



















........



































Template Conservation  .
      
    
      
........
   
        

      
    
      

 
Template Sequence  . ASVLQQQGKLQEALMHYKEA. . . . . . . . IRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQ
Template Known Secondary structure  .TT
........
TT
TT
Template Predicted Secondary structure  .


........






Template SS confidence 
































































   358.360.........370....... ..380.........390.........400.........410...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions