Job Description P76520 Confidence 7.92% Date Thu Jan 5 12:24:00 GMT 2012 Rank 39 Aligned Residues 105 % Identity 14% Template c3mv3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 3.25 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	M	R	D	V	Q	V	A	R	L	A	L	F	H	G	D	P	E	K	A	K	E	L	T	N	E	A	S	A	L	L	S	D	D	S	T	E	W	A	K	F	A	K	P	G	K	K	T	N	L	N	D	D	Q	Y	I	V	I	N	A	S	V	G	I	S	E	S	Y	V	A	T	P	E	K	E	A	A	I	K
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	E	L	L	L	L	A	I	E	V	A	L	L	N	N	N	V	S	T	A	S	T	I	F	D	N	Y	T	N	A	I	E	D	T	V	S	G	D	N	E	X	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	L	A	E	S
Template Known Secondary structure																T	T														T	T		T	T	T			S	S	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																																.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	N	E	K	M	A	K	G	D	K	K	G	A	M	E	E	L	R	L	A	G	V	G	V	M	E	N	Q	Y	L	M	P	L	K	Q	T	R	N	A	L	A	D	A	Q	K	L	L	D	K	K	Q	Y	Y	E	A	N	L	A	L	K	G	A	E	D
Query Conservation
Alig confidence																					.	.	.	.	.	.	.								.	.
Template Conservation																					.	.	.	.	.	.	.								.	.
Template Sequence		Y	I	K	F	A	T	N	K	E	T	A	T	S	N	F	Y	Y	Y	E	.	.	.	.	.	.	.	E	L	S	Q	T	F	P	.	.	T	W	K	T	Q	L	G	L	L	N	L	H	L	Q	Q	R	N	I	A	E	A	Q	G	I	V	E	L	L	L	S
Template Known Secondary structure									T	T	T	T	T								.	.	.	.	.	.	.						S		.	.	S														T	T														S
Template Predicted Secondary structure																					.	.	.	.	.	.	.								.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions