Job Description P76520 Confidence 4.28% Date Thu Jan 5 12:24:00 GMT 2012 Rank 60 Aligned Residues 35 % Identity 26% Template c2rklB_ PDB info PDB header:lipid transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein vta1; PDBTitle: crystal structure of s.cerevisiae vta1 c-terminal domain Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	M	R	D	V	Q	V	A	R	L	A	L	F	H	G	D	P	E	K	A	K	E	L	T	N	E	A	S	A	L	L	S	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	Q	K	L	A	K	Y	A	I	S	A	L	N	Y	E	D	L	P	T	A	K	D	E	L	T	K	A	L	D	L	L	N	S	I
Template Known Secondary structure																T	T																		T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions