Job Description P76520 Confidence 15.92% Date Thu Jan 5 12:24:00 GMT 2012 Rank 23 Aligned Residues 93 % Identity 20% Template c2r5sB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp0806; PDBTitle: the crystal structure of a domain of protein vp0806 (unknown function)2 from vibrio parahaemolyticus rimd 2210633 Resolution 2.14 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	A	R	L	A	L	F	H	G	D	P	E	K	A	K	E	L	T	N	E	A	S	A	L	L	S	D	D	S	T	E	W	A	K	F	A	K	P	G	K	K	T	N	L	N	D	D	Q	Y	I	V	I	N	A	S	V	G	I	S	E	S	Y	V	A	T	P	E	K	E	A	A	I	K	I	A	N	E	K
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Q	V	S	E	L	L	Q	Q	G	E	H	A	Q	A	L	N	V	I	Q	T	L	S	D	E	L	Q	S	R	G	D	V	K	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	C	L
Template Known Secondary structure											T	T												S						T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																																								.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	G	D	K	K	G	A	M	E	E	L	R	L	A	G	V	G	V	M	E	N	Q	Y	L	M	P	L	K	Q	T	R	N	A	L	A	D	A	Q	K	L	L	D	K	K	Q	Y	Y	E	A	N	L	A	L	K	G	A	E	D
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		L	E	T	K	Q	F	E	L	A	Q	E	L	L	A	.	.	.	.	.	.	.	.	T	I	P	L	E	Y	Q	D	N	S	Y	K	S	L	I	A	K	L	E	L	H	Q	Q	A	A	E	S	P	E	L	K	R	L	E	Q	E	L	A
Template Known Secondary structure				T	T										T	.	.	.	.	.	.	.	.	T			G	G	G																			T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions