Return to main results Retrieve Phyre Job Id

Job DescriptionP67910
Confidence99.89%DateThu Jan 5 12:10:53 GMT 2012
Rank63Aligned Residues273
% Identity13%Templated1xgka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.........70.......
Predicted Secondary structure 










....



















Query SS confidence 






































. . . .




































Query Sequence  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV. . . . NLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA
Query Conservation 










  

  

  
  

   
         ....        
                            
Alig confidence 






































....




































Template Conservation 







 

  
   

  
  
    
               
  
  
  
                         
Template Sequence  IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGD
Template Known Secondary structure  STTSTT

S
S
STSTTS

TT
TT
S


STTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE
Query Conservation                                                                                  
Alig confidence  ...............



























............
























Template Conservation  ...............          

   
    
  

   ............               
   
  
  
Template Sequence  . . . . . . . . . . . . . . . EIAIGKDLADAAKRAGTIQHYIYSSMPD. . . . . . . . . . . . HSLYGPWPAVPMWAPKFTVENYVRQ
Template Known Secondary structure  ...............S

S


............GGGTSS



TTTT
Template Predicted Secondary structure  ...............








............









Template SS confidence 















































































   88.90.........100.........110..... ....120.........130.........140
 
   158.160.........170.........180.........190.........200.........210.........220..... ....230...
Predicted Secondary structure 





























....





Query SS confidence 



































































. . . .







Query Sequence  ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL. . . . ENGVSGIF
Query Conservation          
     
                                       
 
 
         ....        
Alig confidence 























.....






































....







Template Conservation         

               .....                         
   
     
   
           
Template Sequence  LGLPSTFVYAGIYNNNFTSLPYPL. . . . . FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR
Template Known Secondary structure  SSS

GGG
BSSS
SS.....
B
TTS
SS
TTS


TT
Template Predicted Secondary structure 









.....





















Template SS confidence 















































































   141........150.........160.... .....170.........180.........190.........200.........210.....
 
   234.....240.........250.........260.........270 .........280..
Predicted Secondary structure 



















...............................




Query SS confidence 




































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .











Query Sequence  NLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RYQAFTQADLTN
Query Conservation   
      
       
                    ...............................        
  
Alig confidence 























.











...............................











Template Conservation          
  
         
  .      
                                                
Template Sequence  IALTFETLSPVQVCAAFSRALNRR. VTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSPGGVISQRVTD
Template Known Secondary structure 
S
TS
.
SS



S


TTS


SS
SGGG

TT




TT
Template Predicted Secondary structure 









.



























Template SS confidence 















































































   216...220.........230......... 240.........250.........260.........270.........280.........290....
 
   283......290.........300........
Predicted Secondary structure 






Query SS confidence 

























Query Sequence  LRAAGYDKPFKTVAEGVTEYMAWLNR
Query Conservation      

  
   
 
 
     
   
Alig confidence 








.















Template Conservation      
    .   

  

       
Template Sequence  EARKLWSGW. RDMEEYAREVFPIEEE
Template Known Secondary structure 
TT
.

T
Template Predicted Secondary structure 



.

Template SS confidence 

























   320........ .330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions