Phyre 2 alignment of P67910 with d1qyda

Job Description P67910
Confidence 99.87% Date Thu Jan 5 12:10:53 GMT 2012

Rank 66 Aligned Residues 276

% Identity 13% Template d1qyda_

SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases

Resolution 2.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence	I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	V	D	.	.	.	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence	V	L	I	V	G	G	T	G	Y	I	G	K	R	I	V	N	A	S	I	S	L	G	H	P	T	Y	V	L	F	R	P	E	V	V	S	N	I	D	K	V	Q	M	L	L	Y	F	K	Q	L	G	A	K	L	I	E	A	S	L	D	D	H	Q	R	L	V	D	A	L	K	Q	V	D	V	V	I	S	A	L	A	G
Template Known Secondary structure					S	T	T	S	T	T											T	T									S			S	S													T	T	T								S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
	7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.

	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	S	T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P	E	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence	G	V	L	S	H	H	I	L	E	Q	L	K	.	.	.	.	.	.	.	.	L	V	E	A	I	K	E	A	G	N	I	K	R	F	L	P	S	E	F	G	M	D	P	D	I	M	E	H	A	L	Q	P	G	S	I	.	.	.	.	.	.	.	.	.	.	T	F	I	D	K	R	K	V	R	R	A	I	E	A	A
Template Known Secondary structure	S	S	S	S	T	T	T	T	T				.	.	.	.	.	.	.	.								S				S					S			S	S		T	T	S						S	S	T	T		.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
	87	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

	159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	S	G	I	.	.	.	F	N	L
Query Conservation																																																																											.	.	.
Alig confidence																							.	.	.	.	.	.	.																																														.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence	S	I	P	Y	T	Y	V	S	S	N	M	F	A	G	Y	F	A	G	S	L	A	Q	.	.	.	.	.	.	.	L	D	G	H	M	M	P	P	R	D	K	V	L	I	Y	G	D	G	N	V	K	G	I	W	V	D	E	D	D	V	G	T	Y	T	I	K	S	I	D	D	P	Q	T	L	N	K	T	M	Y	I	R
Template Known Secondary structure	T			B													T	T	T	S	S		.	.	.	.	.	.	.	T	T			S	S			S	S					B	T	T	S		S																		T	T		G	G	G	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
	149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	D	K	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence	P	P	M	N	I	L	S	Q	K	E	V	I	Q	I	W	E	R	L	S	E	Q	.	N	L	D	K	I	Y	I	S	S	Q	D	F	L	A	D	M	K	D	K	S	Y	E	E	K	I	V	R	C	H	L	Y	Q	I	F	F	R	G	D	L	Y	N	F	E	I	G	P	N	A	I	E	A	T	K	L	Y	P	E	V
Template Known Secondary structure		G	G	G																T		.							B		S								T	T	S		T	T					T	T	T					T	T	S		T	T	T	S	S				S	S									T	T	S
Template Predicted Secondary structure																						.
Template SS confidence
	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

	291	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	P	F	K	T	V	A	E	G	V	T	E	Y	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence	K	Y	V	T	M	D	S	Y	L	E	R	Y	V
Template Known Secondary structure										T	T	T
Template Predicted Secondary structure
Template SS confidence
	301	.	.	.	.	.	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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