Job Description P67910 Confidence 98.49% Date Thu Jan 5 12:10:53 GMT 2012 Rank 145 Aligned Residues 232 % Identity 13% Template c3uxyC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: the crystal structure of short chain dehydrogenase from rhodobacter2 sphaeroides Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	L	V	T	G	A	A	G	G	I	G	G	A	V	V	T	A	L	R	A	A	G	A	R	V	A	V	A	D	R	A	V	A	G	I	A	A	D	L	H	L	P	G	D	L	R	E	A	A	Y	A	D	G	L	P	G	A	V	A	A	G	L	G	R	L	D	I	V	V	N	N	A	G	V	I	S	R	G	R
Template Known Secondary structure						S	S	T	T	S													T	T							S	S			T	T				S							T	T	S																S															B
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P	E	A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	E	T	T	D	A	D	W	S	L	S	L	G	V	N	V	E	A	P	F	R	I	C	R	A	A	I	P	L	X	A	A	A	G	G	G	A	I	V	N	V	A	S	C	W	G	L	R	P	G	P	G	H	A	L	Y	C	L	T	K	A	A	L	A	S	L	T	Q	C	X	G	X	D	H	A	P	Q	G	I
Template Known Secondary structure		G	G	G														T																	T	T														B			T	T	B																						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.
Predicted Secondary structure															.																																																									.	.	.	.
Query SS confidence															.																																																									.	.	.	.
Query Sequence		Q	I	V	G	F	R	Y	F	N	V	Y	G	P	.	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	.	.	.	.	S	G	I	F	N	L
Query Conservation															.																																																									.	.	.	.
Alig confidence															.																												.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	N	A	V	C	P	N	E	V	N	T	P	X	L	R	T	G	F	A	K	R	G	F	D	P	D	R	A	V	A	E	L	G	R	T	V	P	L	G	R	.	.	.	.	.	.	.	.	.	.	I	A	E	P	E	D	I	A	D	V	V	L	F	L	A	S	D	A	A	R	Y	L	C	G	S	L	V	E	V
Template Known Secondary structure									S	S	B											T	T	T												T	T	S	T	T	S	S	.	.	.	.	.	.	.	.	.	.		B														S	G	G	G	T	T		S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		236	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	G	R	A	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	G	K	A	V	A
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions