Return to main results Retrieve Phyre Job Id

Job DescriptionP67910
Confidence98.49%DateThu Jan 5 12:10:53 GMT 2012
Rank146Aligned Residues227
% Identity13%Templatec3toxG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70
Predicted Secondary structure 











..........














Query SS confidence 








































. . . . . . . . . .




























Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN. . . . . . . . . . LVDLNIADYMDKEDFLIQIMAGEEFGDVE
Query Conservation   










  

  

  
  

   
          ..........       
                     
Alig confidence 








































..........




























Template Conservation   






 


 


  
   
  


  
           
            
                        
Template Sequence  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTA
Template Known Secondary structure  SSTTSTT
S
TTT



TT
SS

Template Predicted Secondary structure 



































Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  AIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                                     
                 
  

      
Template Sequence  FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGL
Template Known Secondary structure 





S
S
GGG

TT


SBTTTB

TT
Template Predicted Secondary structure 

















































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   151....... .160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 
...





























Query SS confidence 







. . .




































































Query Sequence  VRQILPEA. . . NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN
Query Conservation          ...       
     
                                       
 
 
           
Alig confidence 







...






















.....













..........
















Template Conservation      
 
     
 

 
 

 
 
         .....          

 
..........   
 


  
 

 
 
Template Sequence  VQALAVELGARGIRVNALLPGGTDTPANFANLAP. . . . . ETRGFVEGLHALKR. . . . . . . . . . IARPEEIAEAALYLASD
Template Known Secondary structure  TTT
SBSSTTSGGG

T.....TTSTTSS..........
B
SG
Template Predicted Secondary structure 
































.....





..........



Template SS confidence 















































































   170.........180.........190.........200... ......210....... ..220.........230....
 
   228. 230.........240..
Predicted Secondary structure 

....








Query SS confidence 

. . . .












Query Sequence  GV. . . . SGIFNLGTGRAES
Query Conservation    ....     
      
Alig confidence 

....












Template Conservation   
  


  
 



  
 
Template Sequence  GASFVTGAALLADGGASVT
Template Known Secondary structure  GGTT

S
STTGGG
Template Predicted Secondary structure 












Template SS confidence 


















   238.240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions