Job Description P67910 Confidence 100.00% Date Thu Jan 5 12:10:53 GMT 2012 Rank 50 Aligned Residues 303 % Identity 14% Template c3slgB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pbgp3 protein; PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																				.	.
Query SS confidence																								.																				.	.
Query Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	.	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	.	.	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C
Query Conservation																								.																				.	.
Alig confidence																								.																				.	.																																	.	.	.
Template Conservation																																																																														.	.	.
Template Sequence		V	L	I	L	G	V	N	G	F	I	G	H	H	L	S	K	R	I	L	E	T	T	D	W	E	V	F	G	M	D	M	Q	T	D	R	L	G	D	L	V	K	H	E	R	M	H	F	F	E	G	D	I	T	I	N	K	E	W	V	E	Y	H	V	K	K	C	D	V	I	L	P	L	V	A	I	A	.	.	.	T
Template Known Secondary structure						S		S	S																							S			T	T	S	G	G	G	G	G	S	T	T								T	T	T													S						B				.	.	.
Template Predicted Secondary structure																																																																														.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		S	S	T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	.	.	.	.	.	.	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R
Query Conservation																																																							.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	T	Y	V	K	Q	P	L	R	V	F	E	L	D	F	E	A	N	L	P	I	V	R	S	A	V	K	Y	G	K	H	L	V	F	P	S	T	S	E	V	Y	G	M	C	A	D	E	Q	F	D	P	D	A	S	A	L	T	Y	G	P	I	N	K	P	R	W	I	Y	A	C	S	K	Q	L	M	D	R	V	I
Template Known Secondary structure																	T	T	T	T											T									G	G	G	G	B	S				S	S	B		T	T	T				B				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		Q	I	L	P	E	A	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	.	.	.	.	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																					.
Template Conservation																																																			.
Template Sequence		W	G	Y	G	M	E	G	L	N	F	T	L	F	R	P	F	N	W	I	G	P	G	L	D	S	I	Y	T	P	K	E	G	S	S	R	V	V	T	Q	F	L	G	H	I	V	R	G	E	N	.	I	S	L	V	D	G	G	S	Q	K	R	A	F	T	Y	V	D	D	G	I	S	A	L	M	K	I	I	E	N	S
Template Known Secondary structure						T	T	T										S				S	S				T	T			B	S		S													T	T			.				G	G	G	G																							G
Template Predicted Secondary structure																																																			.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		229	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		V	S	G	.	.	.	.	.	I	F	N	L	G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K	P	F	K	T	V	A	E	G	V	T	E	Y	M
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.																										.
Template Conservation																																			.
Template Sequence		N	G	V	A	T	G	K	I	Y	N	I	G	N	P	N	N	N	F	S	V	R	E	L	A	N	K	M	L	E	L	A	A	E	.	F	P	E	Y	A	D	S	A	K	R	V	K	L	V	E	T	Q	N	R	V	P	K	I	E	N	T	M	Q	E	L	G	W	A	P	Q	F	T	F	D	D	A	L	R	Q	I	F
Template Known Secondary structure		G	G	T	T	T	T								T	T	S																	T	.										T											B										T
Template Predicted Secondary structure																																			.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		304	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	L	N	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	Y	R	G	H
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions