Return to main results Retrieve Phyre Job Id

Job DescriptionP67910
Confidence98.55%DateThu Jan 5 12:10:53 GMT 2012
Rank127Aligned Residues228
% Identity12%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70..
Predicted Secondary structure 











........














Query SS confidence 








































. . . . . . . .






























Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN. . . . . . . . LVDLNIADYMDKEDFLIQIMAGEEFGDVEAI
Query Conservation   










  

  

  
  

   
          ........       
                       
Alig confidence 








































........






























Template Conservation   






 


 
 
  

  

 


  
           
             
                       
Template Sequence  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV
Template Known Secondary structure  TTTTSTT
SSGGGGTTSSSS


TT
S


Template Predicted Secondary structure 





































Template SS confidence 















































































   21........30.........40.........50.........60.........70.........80.........90.........100
 
   73......80.........90.........100.........110.. .......120.........130.........140.........150
Predicted Secondary structure 

































..


























Query SS confidence 







































. .





































Query Sequence  FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFL. . YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY
Query Conservation                                          ..                                      
Alig confidence 







































..





































Template Conservation                                                     
    
            
  

 
    
Template Sequence  VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGF
Template Known Secondary structure 








TTT

TTSS


SBTTTB

TT
Template Predicted Secondary structure 





















































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   151........160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 
































.
Query SS confidence 














































































.
Query Sequence  VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV.
Query Conservation                 
     
                                       
 
 
             .
Alig confidence 














...































..........


















.
Template Conservation      
 
     


...
 
 

 
 
                  
  
..........   




  
  
 
    
Template Sequence  MRTAAIELAPRGVTV. . . NAILPGNILTEGLVDMGEEYISGMARSIPMGM. . . . . . . . . . LGSPVDIGHLAAFLATDEAG
Template Known Secondary structure  GGGT
...
SB

TT
TT
TTSS..........
B
SGGGT
Template Predicted Secondary structure 









...


















..........




Template SS confidence 















































































   181........190..... ....200.........210.........220....... ..230.........240.......
 
   230.........240.
Predicted Secondary structure  ...







Query SS confidence  . . .











Query Sequence  . . . SGIFNLGTGRAE
Query Conservation  ...     
      
Alig confidence  ...











Template Conservation   


  
 



  
Template Sequence  YITGQAIVVDGGQVL
Template Known Secondary structure  T

S
STTTT
Template Predicted Secondary structure 










Template SS confidence 














   248.250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions