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Job DescriptionP67910
Confidence98.39%DateThu Jan 5 12:10:53 GMT 2012
Rank182Aligned Residues236
% Identity14%Templatec3pgxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:carveol dehydrogenase; PDBTitle: crystal structure of a putative carveol dehydrogenase from2 mycobacterium paratuberculosis bound to nicotinamide adenine3 dinucleotide
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30........ .40.........50.........60
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Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK. . . . . . . . . . . . . . . . . . . . FVNLVDLNIADYMDKEDFLIQI
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Template Sequence  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV
Template Known Secondary structure  STTSTT


S


TT

S



TTT



TT
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   61........70.........80.........90.........100.........110.........120.........130.........140
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Query Sequence  MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVY
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Template Sequence  ADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNG
Template Known Secondary structure  S









B
GGG

T
S


GGGTS

TTB
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   141........150.........160.........170.........180.........190.........200.........210.........220
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Query Sequence  GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV
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Template Sequence  HYSASKHGLTALTNTLAIELGEYGIRVNSIH. PYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG. FMTADEVADV
Template Known Secondary structure  GGGT.
SB
SGGG
T
GGGGGGS

BTTB
SS.
B
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   173......180.........190.........200... ......210.........220.........230.........240 .........250
 
   221....... .230........
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Query Sequence  NLWFLENG. . . . VSGIFNLGTG
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Template Sequence  VAWLAGDGSGTLTGTQIPVDKG
Template Known Secondary structure  SGGGTT
SS
STT
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   251........260.........270..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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