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Job DescriptionP67910
Confidence98.98%DateThu Jan 5 12:10:53 GMT 2012
Rank89Aligned Residues216
% Identity15%Templatec3p19A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative blue fluorescent protein; PDBTitle: improved nadph-dependent blue fluorescent protein
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30........ .40.........50.........60.........70.........
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Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK. FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS
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Template Sequence  LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGM
Template Known Secondary structure  STTSTT

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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   80.........90.........100.........110.........120. ........130.........140.........150.......
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Query Sequence  STTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG. GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE.
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Template Sequence  MLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEV
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TTTS
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GGGTS

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   158.160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  . . ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVS
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Template Sequence  AASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGG. . . . . . . . . . . . . . VLAADDVARAVLFAYQQPQN
Template Known Secondary structure  GGGT

SBSSSGGGG
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   164.....170.........180.........190.........200.... .....210.........220....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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