Return to main results Retrieve Phyre Job Id

Job DescriptionP67910
Confidence99.75%DateThu Jan 5 12:10:53 GMT 2012
Rank79Aligned Residues201
% Identity19%Templatec3nzoB_
PDB info PDB header:lyaseChain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60.........
Predicted Secondary structure 










............













Query SS confidence 






































. . . . . . . . . . . .




























Query Sequence  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV. . . . . . . . . . . . NLVDLNIADYMDKEDFLIQIMAGEEFGDV
Query Conservation 










  

  

  
  

   
         ............        
                    
Alig confidence 






































............




























Template Conservation 







 


 

  

  
   

   
                         
  
  
             
 
 
Template Sequence  FLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNXVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYVL
Template Known Secondary structure  TTTSTT

S
S



SS


TTS



S
Template Predicted Secondary structure 




























Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 





























































Query SS confidence 















































































Query Sequence  EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDE
Query Conservation                                                                                  
Alig confidence 




















































.............













Template Conservation 
 

   
               

 

 


 

    
 
 
 


  
  .............
 
 

 

   
 
Template Sequence  NLSALKHVRSEKDPFTLXRXIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAAN. . . . . . . . . . . . . PVNXXGASKRIXEX
Template Known Secondary structure 





GGGGSSTTT
S

S
SS
.............

S
Template Predicted Secondary structure 
























.............


Template SS confidence 















































































   115....120.........130.........140.........150.........160....... ..170.........180.
 
   150.........160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  YVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV
Query Conservation                  
     
                                       
 
 
             
Alig confidence 




..



















.......................





























Template Conservation       ..        

 


 

 
 ....................... 
  
 



       

 

        
Template Sequence  FLXRK. . SEEIAISTARFANVAFSDGS. . . . . . . . . . . . . . . . . . . . . . . RIQKNQPIKRYFVTPQESGELCLXSCIFGE
Template Known Secondary structure  ..TTTS



BTT
TT
.......................
TTTT






B


Template Predicted Secondary structure  ..








.......................







Template SS confidence 















































































   182.... ...190.........200...... ...210.........220.........230......
 
   230.........240
Predicted Secondary structure 






Query SS confidence 










Query Sequence  SGIFNLGTGRA
Query Conservation       
     
Alig confidence 










Template Conservation             
Template Sequence  NRDIFFPKDXA
Template Known Secondary structure  TT



S
Template Predicted Secondary structure 







Template SS confidence 










   250.........260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions