Job Description P67910 Confidence 100.00% Date Thu Jan 5 12:10:53 GMT 2012 Rank 25 Aligned Residues 304 % Identity 21% Template c3lu1C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:wbgu; PDBTitle: crystal structure analysis of wbgu: a udp-galnac 4-epimerase Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	V	.	.	.	.	.	.	.	.	.	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	I	T	G	V	A	G	F	I	G	S	N	L	L	E	K	L	L	K	L	N	Q	V	V	I	G	L	D	N	F	S	T	G	H	Q	Y	N	L	D	E	V	K	T	L	V	S	T	E	Q	W	S	R	F	C	F	I	E	G	D	I	R	D	L	T	T	C	E	Q	V	M	K	G	V	D	H	V	L	H	Q
Template Known Secondary structure						T	T	T	S													T	T									S	S	S													S						T	T								T	T								T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	E	G	A	C	S	S	T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	G	S	V	P	R	S	I	V	D	P	I	T	T	N	A	T	N	I	T	G	F	L	N	I	L	H	A	A	K	N	A	Q	V	Q	S	F	T	Y	A	A	S	S	S	T	Y	G	D	H	P	A	L	P	K	V	E	E	N	I	G	N	P	L	S	P	Y	A	V	T	K	Y	V	N	E	I	Y	A	Q
Template Known Secondary structure																						T														T		S								G	G	G	G	T	T				S	S	B		T	T							S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		Q	I	L	P	E	A	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	.	.	.	E	N	G	V
Query Conservation																																																																											.	.	.
Alig confidence																																															.																												.	.	.
Template Conservation																																															.
Template Sequence		V	Y	A	R	T	Y	G	F	K	T	I	G	L	R	Y	F	N	V	F	G	R	R	Q	D	P	N	G	A	Y	A	A	V	I	P	K	W	T	A	A	M	L	K	G	D	D	.	V	Y	I	N	G	D	G	E	T	S	R	D	F	C	Y	I	D	N	V	I	Q	M	N	I	L	S	A	L	A	K	D	S	A	K
Template Known Secondary structure																		S			S	T	T					S	T	T														T			.					S		S																					T			G	G	G
Template Predicted Secondary structure																																															.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	F	N	L	G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K	P	F	K	T	V	A	E	G	V	T	E	Y	M	A	W	L	N	R	D
Query Conservation
Alig confidence																																			.	.	.
Template Conservation																																			.	.	.
Template Sequence		D	N	I	Y	N	V	A	V	G	D	R	T	T	L	N	E	L	S	G	Y	I	Y	D	E	L	N	L	I	H	H	I	K	Y	.	.	.	R	E	F	R	S	G	D	V	R	H	S	Q	A	D	V	T	K	A	I	D	L	L	K	Y	R	P	N	I	K	I	R	E	G	L	R	L	S	M	P	W	Y	V	R	F
Template Known Secondary structure		S						S		S																		T	T	T					.	.	.					T	T			S	B			B
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions