Return to main results Retrieve Phyre Job Id

Job DescriptionP67910
Confidence98.57%DateThu Jan 5 12:10:53 GMT 2012
Rank119Aligned Residues227
% Identity11%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30...... ...40.........50.........60.........70..
Predicted Secondary structure 











........














Query SS confidence 



































. . . . . . . .



































Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG. . . . . . . . TKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAI
Query Conservation   










  

  

  
  

   
     ........            
                       
Alig confidence 



































........



































Template Conservation   










 


  

  

 


  
                         
                       
Template Sequence  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI
Template Known Secondary structure  TTTSTT
SS
TTTS
S
TTSS


Template Predicted Secondary structure 























Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                                                    
   
            
 


 
      
Template Sequence  LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTR
Template Known Secondary structure 







SSGGG

TTT

TT


T

TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   126...130.........140.........150.........160.........170.........180.........190.........200.....
 
   153..... .160.........170.........180.........190.........200.........210.........220.........
Predicted Secondary structure 
...































Query SS confidence 





. . .






































































Query Sequence  QILPEA. . . NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV
Query Conservation        ...       
     
                                       
 
 
             
Alig confidence 





...





















.....











..........





















Template Conservation    
      




 
 

 
 
        .....           
..........  
   




 

 

 
  
Template Sequence  SLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD. . . . . EKKVSQFGSNVP. . . . . . . . . . XQRPGQPYELAPAYVYLASSDS
Template Known Secondary structure  GGGT

SB
STTTTTTS
.....TTTTTTST..........TSS
B
GGGTSGGG
Template Predicted Secondary structure 





















.....


..........






Template SS confidence 















































































   206...210.........220.........230...... ...240........ .250.........260.........270
 
   230.........240..
Predicted Secondary structure  ....








Query SS confidence  . . . .












Query Sequence  . . . . SGIFNLGTGRAES
Query Conservation  ....     
      
Alig confidence  ....












Template Conservation    


  
 



    
Template Sequence  SYVTGQXIHVNGGVIVN
Template Known Secondary structure  TT

S
SSS



Template Predicted Secondary structure 










Template SS confidence 
















   271........280.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions