Job Description P67910 Confidence 99.87% Date Thu Jan 5 12:10:53 GMT 2012 Rank 65 Aligned Residues 261 % Identity 15% Template c3i5mA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera Resolution 2.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	.	.	.	.	.	.	.	.	F	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	I	A	G	A	T	G	F	I	G	Q	F	V	A	T	A	S	L	D	A	H	R	P	T	Y	I	L	A	R	P	G	P	R	S	P	S	K	A	K	I	F	K	A	L	E	D	K	G	A	I	I	V	Y	G	L	I	N	E	Q	E	A	M	E	K	I	L	K	E	H	E	I	D	I	V	V	S	T	V	G
Template Known Secondary structure							T	T	S													T	T									S	S																T	T								T	T													T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	G	A	C	S	S	T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																								.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																								.	.
Template Sequence		G	E	S	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	A	L	V	K	A	M	K	A	V	G	T	I	K	R	F	L	P	S	E	F	G	H	D	V	.	.	.	.	.	.	.	N	R	A	D	P	V	E	P	G	L	N	M	Y	R	E	K	R	R	V	R	Q	L	V	.	.
Template Known Secondary structure		T	T	S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S					S			S	S		T	.	.	.	.	.	.	.	T	T					T	T																.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.																								.	.
Template SS confidence
		93	.	.	.	.	.																	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	L	P	E	A	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	S	G	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	E	S	G	I	P	F	T	Y	I	C	C	N	S	I	A	S	W	P	Y	Y	N	N	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	D	F	F	Q	I	Y	G	D	G	N	V	K	A	Y	F	V	A	G	T	D	I	G	K	F	T	M	K	T	V	D	D	V	R	T	L	N	K
Template Known Secondary structure		.	.			T	T			B									S	S						.				.	.	.	.	.	.	.	.	.	.	.	.	.		S	S						T	T	S																				T	T		G	G	G	T	T
Template Predicted Secondary structure		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.														.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
			232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																											.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	I	F	N	L	G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R
Query Conservation		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	H	F	R	P	S	C	N	C	L	N	I	N	E	L	A	S	V	W	E	K	K	I	G	R	T	L	P	R	V	T	V	T	E	D	D	L	L	A	A	A	G	E	N	I	I	P	Q	S	V	V	A	A	F	T	H	D	I	F	I	K	G	C	Q	V	N	F	S	I	D	G	P	E	D	V	E	V	T	T
Template Known Secondary structure								G	G	G																T	S																	T	T			T	T													T	T		T	T	T	S	S				S	T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	Y	D	K	P	F	K	T	V	A	E	G	V	T	E	Y	M
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		L	Y	P	E	D	S	.	F	R	T	V	E	E	C	F	G	E	Y	I
Template Known Secondary structure			S	T	T			.												T
Template Predicted Secondary structure								.
Template SS confidence
		298	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions