 |
Job Description | P67910 | Confidence | 97.56% | Date | Thu Jan 5 12:10:53 GMT 2012 |
Rank | 288 | Aligned Residues | 87 |
% Identity | 17% | Template | c2uv8C_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); |
PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution
|
Resolution | 3.10 Å |
|
 |
  |   |
1 | . | . | . | . | . | |
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | I | I | V | T | G | . |
G | A | G | F | I | G | S | N | I | V | K | A | L | N | D | K | G | I | T | D | I | L | V | V | D | N | L | K | D | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | K | F | V | N | L | V | D | L | N | I | A | D | Y | M | D | K | E | D | F | L | I | Q | I | M | A | G | E | E | F | G |
Query Conservation |   |
  |
|
|
|
|
| . |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|   |
|
|   |   |
|
|
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |
Template Sequence |   |
Y | V | L | I | T | G | A | G | K | G | S | I | G | A | E | V | L | Q | G | L | L | Q | G | G | A | K | V | V | V | T | T | S | R | F | S | K | Q | V | T | D | Y | Y | Q | S | I | Y | A | K | Y | G | A | K | G | S | T | L | I | V | V | P | F | N | Q | G | S | K | Q | D | V | E | A | L | I | E | F | I | Y | D | T | E |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
677 | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . |
  |
  |   |
68 | |
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | . |
. |
. |
. |
. |
. |
. |
V | E | A | I | F | H | E | G | A | C | S | S | T | T | E | W | D | G | K |
Query Conservation |   |
  | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|
|
|
Template Sequence |   |
K | N | G | G | L | G | W | D | L | D | A | I | I | P | F | A | A | I | P | E | Q | G | I | E | L | E | H |
Template Known Secondary structure |   |
T | T | T | S |
|
|
|
|
| S |  |  |  |  |
|
|
|
|
|
|
| S | B |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
757 | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|