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Job DescriptionP67910
Confidence98.67%DateThu Jan 5 12:10:53 GMT 2012
Rank103Aligned Residues225
% Identity12%Templatec2p68A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of aq_1716 from aquifex aeolicus vf5
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70.
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Query Sequence  MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN. . . . . . . . . LVDLNIADYMDKEDFLIQIMAGEEFGDVEA
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Template Sequence  VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI
Template Known Secondary structure  SS
SSTT
S





TT
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV
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Template Sequence  LVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFT
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GGG

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   8990.........100.........110.........120.........130.........140.........150.........160........
 
   152.......160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV. .
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Template Sequence  KSLAKELAPRNVLVNA. . . VAPGFIETDMTAVLSEEIKQKYKEQIP. . . . . . . . . . LGRFGSPEEVANVVLFLCSELASY
Template Known Secondary structure  GGGT...
SB

GGGGGS
TT
T..........TSS
B
SGGGTT
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   169170.........180.... .....190.........200.........210. ........220.........230.....
 
   230........
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Query Sequence  . . SGIFNLGTG
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Template Sequence  ITGEVIHVNGG
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   236...240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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