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Job DescriptionP67910
Confidence100.00%DateThu Jan 5 12:10:53 GMT 2012
Rank36Aligned Residues307
% Identity13%Templatec2hrzA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IIVTGGAGFIGSNIVKALNDKGITDILVVD. . . . . . . . NLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIF
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Template Sequence  IAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIFHLAAI
Template Known Secondary structure  TTTS
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Query Sequence  HEGACSSTTEWDGKYMMDNNYQYSKE. . LLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV
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Template Sequence  VSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLL
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Query Sequence  RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL. . . . EN
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Template Sequence  SDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQE. AVLPVPESIRHWHASPRSAVGFLIHGAXIDVEK
Template Known Secondary structure  TTS

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SGGGTT

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   171........180.........190.........200.........210...... ...220.........230.........240.........
 
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Query Sequence  GVSGIFNLGTGRAESFQAVADATLAYHK. . . KGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMA
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Template Sequence  VGPRRNLSXPGLSATVGEQIEALRKVAGEKAVALIRREPNEXIXRXCEGWAPGFEAKRARE. LGFTAESSFEEIIQVHIE
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   250.........260.........270.........280.........290.........300.........310 .........320........
 
   305....310
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Query Sequence  WLNRDA
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Template Sequence  DELGGS
Template Known Secondary structure  STT
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   329330....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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