Job Description P67910 Confidence 98.63% Date Thu Jan 5 12:10:53 GMT 2012 Rank 108 Aligned Residues 173 % Identity 12% Template c2hlpB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the e267r mutant of a halophilic2 malate dehydrogenase in the apo form Resolution 2.59 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	I	.	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C	S	S
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		V	S	V	V	G	A	A	G	T	V	G	A	A	A	G	Y	N	I	A	L	R	D	I	A	D	E	V	V	F	V	D	I	P	D	K	E	D	D	T	V	G	Q	A	A	D	T	N	H	G	I	A	Y	D	S	N	T	R	V	R	Q	G	G	Y	E	D	T	A	G	S	D	V	V	V	I	T	A	G	I	P	R
Template Known Secondary structure						T	T	T	S													T	T			S								G	G	G																T	T	T										G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P	E	A	N	S
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		Q	P	G	Q	T	R	I	D	L	A	G	D	N	A	P	I	M	E	D	I	Q	S	S	L	D	E	H	N	D	D	Y	I	S	L	T	T	S	N	P	V	D	.	L	L	N	R	H	L	Y	E	A	G	D	R	S	R	E	Q	V	I	G	F	G	G	R	L	D	S	A	R	F	R	Y	V	L	S	E	E	F	D
Template Known Secondary structure			T	T																							T	T		S	S								S	S			.									T	S		S		T	T	T																						T
Template Predicted Secondary structure																																											.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	V	Q	N	V	E	G	T	I	L	G	E	H	G
Template Known Secondary structure				G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions