Job Description P67910 Confidence 99.84% Date Thu Jan 5 12:10:53 GMT 2012 Rank 71 Aligned Residues 262 % Identity 15% Template c2exxB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hscarg protein; PDBTitle: crystal structure of hscarg from homo sapiens in complex with nadp Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																									.																.	.	.
Query SS confidence																									.																.	.	.
Query Sequence		M	I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	.	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	.	.	.	F	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G
Query Conservation																									.																.	.	.
Alig confidence																									.																.	.	.																																		.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		L	V	V	V	F	G	G	T	G	A	Q	G	G	S	V	A	R	T	L	L	E	D	G	T	F	K	V	R	V	V	T	R	N	P	R	K	K	A	A	K	E	L	R	L	Q	G	A	E	V	V	Q	G	D	Q	D	D	Q	V	I	M	E	L	A	L	N	G	A	Y	A	T	F	I	V	T	N	.	.	.	.	.
Template Known Secondary structure							T	T	T	S															S	S							S	S	T	T	S									T	T								S	S										T	T		S								.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	S	S	T	T	E	W	D	G	K	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E	Y	V	R	Q	I	L	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Y	W	E	S	C	S	Q	E	Q	E	V	K	Q	G	K	L	L	A	D	L	A	R	R	L	G	L	H	Y	V	V	Y	S	G	L	E	N	I	.	.	.	.	.	.	.	.	.	.	.	.	K	K	L	T	A	G	R	L	A	A	A	H	F	D	G	K	G	E	V	E	E	Y	F	R
Template Known Secondary structure		.	.	.	.	.	.	.	S	S	S		S																			T	T													.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.													.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		E	A	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L	E	N	G	V	.	.	S	G	I	F	N
Query Conservation																																																																											.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	G	V	P	M	T	S	V	R	L	P	C	Y	F	E	N	L	L	S	H	F	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	A	P	D	G	K	S	Y	L	V	P	M	D	G	M	S	V	S	D	L	G	P	V	V	L	S	L	L	K	M	P	E	K	Y	V	G	Q	N	I
Template Known Secondary structure				T												G	G	G	G	T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T	T													G	G	G																T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.							.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		L	G	T	G	R	A	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	D	K	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y	D	K	P	F	K	T	V	A	E	G	V	T	E	Y	M	.	.	.	.	.	.	A	W	L	N	R
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		G	L	S	T	C	R	H	T	A	E	E	Y	A	A	L	L	T	K	H	T	R	K	V	V	H	D	A	K	M	T	P	E	D	Y	E	K	.	.	.	.	.	.	.	.	D	L	A	N	M	F	R	F	Y	A	L	R	P	D	R	D	I	E	L	T	L	R	L	N	P	K	A	L	T	L	D	Q	W	L	E	Q
Template Known Secondary structure					S																	T	S									T	T	T	T	T		.	.	.	.	.	.	.	.										T	T														T	T										T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		309	310
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	K
Template Known Secondary structure		T	G
Template Predicted Secondary structure
Template SS confidence
		292	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions