Job Description P67910 Confidence 100.00% Date Thu Jan 5 12:10:53 GMT 2012 Rank 2 Aligned Residues 302 % Identity 18% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																	.	.
Query SS confidence																								.																	.	.
Query Sequence		I	I	V	T	G	G	A	G	F	I	G	S	N	I	V	K	A	L	N	D	K	G	.	I	T	D	I	L	V	V	D	N	L	K	D	G	T	K	F	.	.	V	N	L	V	D	L	N	I	A	D	Y	M	D	K	E	D	F	L	I	Q	I	M	A	G	E	E	F	G	D	V	E	A	I	F	H	E	G	A	C
Query Conservation																								.																	.	.
Alig confidence																								.																	.	.																								.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	H	V	K	.	.	.	.	.	K	C	D	V	V	L	P	L	V	A	I
Template Known Secondary structure						T	T	T	S													S	S	S								S			T	T	T	G	G	G	T	T		T	T								T	T	T											.	.	.	.	.			S
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.						.	.	.	.	.	.	.	.	390	.	.
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																																																	.	.	.	.	.	.	.
Query SS confidence											.	.																																																	.	.	.	.	.	.	.
Query Sequence		S	S	T	T	E	W	D	G	K	.	.	Y	M	M	D	N	N	Y	Q	Y	S	K	E	L	L	H	Y	C	L	E	R	E	I	P	F	L	Y	A	S	S	A	A	T	Y	G	G	R	T	S	D	F	I	E	S	R	E	Y	E	K	.	.	.	.	.	.	.	P	L	N	V	Y	G	Y	S	K	F	L	F	D	E
Query Conservation											.	.																																																	.	.	.	.	.	.	.
Alig confidence											.	.																																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G	P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R
Template Known Secondary structure				T						S									T													T	T									G	G	G	G	B	T			S	S	S	B		T	T	T				B				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		Y	V	R	Q	I	L	P	E	A	N	S	Q	I	V	G	F	R	Y	F	N	V	Y	G	P	R	E	G	H	K	G	.	.	.	.	S	M	A	S	V	A	F	H	L	N	T	Q	L	N	N	G	E	S	P	K	L	F	E	G	S	E	N	F	K	R	D	F	V	Y	V	G	D	V	A	D	V	N	L	W	F	L
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																			.
Template Conservation																																																						.
Template Sequence		V	I	W	A	Y	G	E	K	E	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	.	I	K	L	I	D	G	G	K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I
Template Known Secondary structure																					S			S	T	T	S	S						T	T	T		S													T			.					G	G	G
Template Predicted Secondary structure																																																						.
Template SS confidence
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		226	.	.	.	230	.					.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.													.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	N	G	V	S	G	.	.	.	.	I	F	N	L	G	T	G	R	A	.	E	S	F	Q	A	V	A	D	A	T	L	A	Y	H	K	K	G	Q	I	E	Y	I	P	F	P	D	K	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	R	Y	Q	A	F	T	Q	A	D	L	T	N	L	R	A	A	G	Y
Query Conservation								.	.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.										.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P	E	N	E	A	S	I	E	E	L	G	E	M	L	L	A	S	F	E	K	H	P	L	R	H	H	F	P	P	F	A	G	F	R	V	V	E	S	S	S	Y	Y	G	K	G	Y	Q	D	V	E	H	R	K	P	S	I	R	N	A	H	R	C	L	D
Template Known Secondary structure			T	G	G	G	T	T	T	T								G	G	G																			T	T	G	G	G	S											T						T	T					S				B
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P	F	K	T	V	A	E	G	V	T	E	Y	M	A	W	L	N	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	P	K	I	D	M	Q	E	T	I	D	E	T	L	D	F	F	L	R	T
Template Known Secondary structure						S															T	T
Template Predicted Secondary structure
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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