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Job DescriptionP67910
Confidence95.57%DateThu Jan 5 12:10:53 GMT 2012
Rank326Aligned Residues175
% Identity13%Templatec1b8vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.........50.... .....60.........70..
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Query Sequence  IIVTGGAGFIGSNIVKALNDKG. . . . ITDILVVDNLKDGTKFVNLVDLNIADYMDKE. . . . . DFLIQIMAGEEFGDVEAI
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Template Sequence  VAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVA
Template Known Secondary structure  STTSTTTTT
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   73......80.........90.........100........ .110.........120.........130.........140.........150.
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Query Sequence  FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE. IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV
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Template Sequence  LLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRAL
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   152.......160.........170......
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Query Sequence  RQILPEANSQIVGFRYFNVYGPREG
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Template Sequence  SQIAAKTGKPVSSIEKLFVWGNHSP
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   168.170.........180.........190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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