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Job DescriptionP15288
Confidence100.00%DateThu Jan 5 11:34:45 GMT 2012
Rank40Aligned Residues276
% Identity16%Templated1z2la1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.. .......30.........40.........50.........60.........70........
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Query Sequence  PQPLWDIFAKICSI. . . . . . . . . . PHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLD
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Template Sequence  RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGT. . EYPQEVVLSGSHID
Template Known Secondary structure  TTB
TTSSB


TTSTT

TTS


S..S

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   8.10.........20.........30.........40.........50.........60.........70. ........80.....
 
   7980.........90.........100.........110.........120.........130.. .......140.........150.......
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Query Sequence  MVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENV. VHGPLEVLLTMTEEAGMDGAFGLQG
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Template Sequence  TVV. . . . . . . . . . . . . . . . . . . . . . . . . NGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGS
Template Known Secondary structure 

T.........................TB
SSTT
S
SS
SS

SSS
S
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   86.. .90.........100.........110.........120.........130.........140
 
   158.160.........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  NWLQADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAG
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Template Sequence  KNIFGLANPDDVRNICDAKGNSFVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AMKACGFTLPNAP. . . . . . . . . . . . .
Template Known Secondary structure  TT


GGGTSS


SSS

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SS
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   141........150.........160..... ....170........
 
   238.240.........250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  HAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
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Query Sequence  DTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LTPRQDIKAFVELHIEQGC. . . . . . . . . . . VLESNGQSIGVVNAIV
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SS...........TT


B

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   179180.........190....... ..200.........210...
 
   398.400.........410.........420.........430.........440.........450.. .......460.........470......
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Query Sequence  GWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPT. ITGPHSPDEQVHIESVGHYWTLLT
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Template Sequence  PM. . . . NKELVATLTELCERE. KLNYRVMHSGAGHDAQIFAPR. . VPTCMIFIPSINGISHNPAERTNITDLAEGVKTLA
Template Known Secondary structure  B
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T.T



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GGG

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   331. .......340....... ..350.........360........ .370.........380.........390.........400...
 
   477..480.....
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Query Sequence  ELLKEIPAK
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Template Sequence  LMLYQLAWQ
Template Known Secondary structure  S
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   404.....410..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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