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Job DescriptionP15288
Confidence99.97%DateThu Jan 5 11:34:45 GMT 2012
Rank45Aligned Residues250
% Identity22%Templated1xfoa2
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution1.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20......... 30.........40.........50.........60.........70.........80.........90.
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Query Sequence  WDIFAKICSIPHPSYHE. EQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDF
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Template Sequence  YELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGE. . . . . GPKVMIAAHMDQI. . . . . . . . . . .
Template Known Secondary structure  S

BTT
GGGTGGGSS
TT



S.....S


B
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   910.........20.........30.........40.........50......... 60.........70..
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  TKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSE
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Template Sequence  . WDGRLERLGKHRFVSIAF. . . . DDRIAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTI
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TTTTT....

S
SSS
STTTS

S
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   164.....170.........180. ........190.........200.........210.........220.........230........
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNG
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Template Sequence  AADIPGTPEHKQVTHLGKGTAIKIMDRSV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B

STT

GGG
BS
TTS

SS
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   239240.........250.........260.......
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  GTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGV
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   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  IRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ICHPTIVRWL
Template Known Secondary structure  ......................................................................B

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   268.270.......
 
   412.......420.........430 .........440.........450.........460.........470.........480.....
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Query Sequence  RETYQRLFNKTPNIQIIHA. GLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK
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Template Sequence  EELAKKH. EIPYQLEILLGGGTDAGAIHLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHEL
Template Known Secondary structure  T.T


SS


TTTSTT


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GGG
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   278.280.... .....290.........300.........310.........320.........330.........340.........350.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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