|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
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. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
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|  |
Query SS confidence |   |
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| . |
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. |
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| . |
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. |
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. |
. |
. |
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Query Sequence |   |
L | S | Q | L | S | P | Q | P | L | W | D | I | F | A | K | I | C | S | I | P | H | . |
. |
. |
P | S | Y | H | E | E | Q | L | A | E | Y | I | V | G | W | A | K | E | K | G | F | H | V | E | R | D | Q | V | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | I | L | I | R | K | P | A | T | A | G | M | E | N | R | K | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
| . | . | . |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
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| . | . |
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Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|   | . | . |   |   |   |   |   |   |
Template Sequence |   |
L | P | Q | V | D | A | S | Q | I | T | G | T | I | S | S | L | E | S | F | T | N | R | F | Y | T | T | T | S | G | A | Q | A | S | D | W | I | A | S | E | W | Q | A | L | S | A | S | L | P | N | A | S | V | K | Q | V | S | H | S | G | Y | N | Q | K | S | V | V | M | T | I | T | G | S | . |
. |
E | A | P | D | E | W |
Template Known Secondary structure |   |
G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
|
| S | . | . | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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| . | . |
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|  |
Template SS confidence |   |
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  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . |
  |
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
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|  |  |  |  |  |  |  |
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Query SS confidence |   |
|
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| . |
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Query Sequence |   |
V | V | L | Q | A | H | L | D | M | V | P | Q | K | N | N | D | T | V | H | D | F | T | K | D | P | I | Q | P | Y | I | D | G | E | W | V | K | A | R | G | T | T | L | G | A | D | N | G | I | G | M | A | S | A | L | A | V | L | A | D | E | N | . |
V | V | H | G | P | L | E | V | L | L | T | M | T | E | E | A | G | M |
Query Conservation |   |
|   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . |
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|
|
Template Conservation |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |
Template Sequence |   |
I | V | I | G | G | H | L | D | S | T | I | G | S | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | N | E | Q | S | V | A | P | G | A | D | D | D | A | S | G | I | A | A | V | T | E | V | I | R | V | L | S | E | N | N | F | Q | P | K | R | S | I | A | F | M | A | Y | A | A | E | E | V | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
|
| S | S | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|
|
|
|
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |  |  |  |  |  |  | S |
| G | G | G | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
D | G | A | F | G | L | Q | G | N | W | L | Q | A | D | I | . |
. |
. |
. |
L | I | N | T | D |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
Template Sequence |   |
R | G | S | Q | D | L | A | N | Q | Y | K | S | E | G | K | N | V | V | S | A | L | Q | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |