Return to main results Retrieve Phyre Job Id

Job DescriptionP15288
Confidence100.00%DateThu Jan 5 11:34:45 GMT 2012
Rank1Aligned Residues484
% Identity64%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  SELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVP
Query Conservation                   
  


 
  
      
   
   
  
  
  


               
 
  
 



Alig confidence 















































































Template Conservation                   
  


 
  
      
   
   
  
  
   

 
             


  
 



Template Sequence  SEISTLSPAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVP
Template Known Secondary structure 

GGGSSSTTS

BTT

TTTT


TTS



SS

SB



B

Template Predicted Secondary structure 




























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  QKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQ
Query Conservation           
  


      
 
 


     
        
  
         
       

 
  
          
Alig confidence 















































































Template Conservation           
  


     

 
 


  
  
 
  


 
            
  
   


 
  
          
Template Sequence  QKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGMTGAFGLEAGWLK
Template Known Secondary structure 
B
SS



TTTS


TTSSB


T
SS


S
S
SSSTTS

TTS

Template Predicted Secondary structure 












































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEE
Query Conservation         
                              
     
   
    
           

         
   
Alig confidence 















































































Template Conservation         
                        
     
     
 
 
    
          


   
     
   
Template Sequence  GDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE
Template Known Secondary structure 
S




TT





TT




BTTTGGGS



Template Predicted Secondary structure 






































Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LDLRLIDFNGGTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFI
Query Conservation            
                                                                     
Alig confidence 















































































Template Conservation                  

                                                              
Template Sequence  LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFI
Template Known Secondary structure  T

S
TTB



GGGTTT






S

Template Predicted Secondary structure 






























Template SS confidence 















































































   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  RLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQP
Query Conservation          
                                  
             
          

          
Alig confidence 















































































Template Conservation                                             
             
          
           
Template Sequence  AALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFSGAYPGWKP
Template Known Secondary structure  S

S


SSSTT
TTSSTT


B

Template Predicted Secondary structure 

































Template SS confidence 















































































   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  DANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKE
Query Conservation        
  
  
     
         



          
  
  

     
   
 
 
         
   
  
Alig confidence 















































































Template Conservation       

  
        
         



          

 
  

     
   
 
 
         
   
  
Template Sequence  DADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEA
Template Known Secondary structure 
SS
TTTTTT

S

SS

GGGGGGSSSS





STTSTT
T
Template Predicted Secondary structure 




























Template SS confidence 















































































   406...410.........420.........430.........440.........450.........460.........470.........480.....
 
   482...
Predicted Secondary structure 


Query SS confidence 



Query Sequence  IPAK
Query Conservation 

  
Alig confidence 



Template Conservation 
   
Template Sequence  IPEK
Template Known Secondary structure 

B
Template Predicted Secondary structure 
Template SS confidence 



   486...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions