Job Description P15288 Confidence 98.77% Date Thu Jan 5 11:34:45 GMT 2012 Rank 71 Aligned Residues 137 % Identity 15% Template c3iibA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase m28; PDBTitle: crystal structure of peptidase m28 precursor (yp_926796.1) from2 shewanella amazonensis sb2b at 1.70 a resolution Resolution 1.70 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		S	I	P	H	P	S	Y	H	E	E	Q	L	A	E	Y	I	V	G	W	A	K	E	K	G	F	H	V	E	R	D	.	.	.	.	.	.	.	.	.	Q	V	G	N	I	L	I	R	K	P	A	T	A	G	M	E	N	R	K	P	V	V	L	Q	A	H	L	D	M	V	P	Q	K	N	N	D	T	V	H	D	F
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.													.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		A	I	P	A	A	A	I	S	N	P	D	A	D	L	I	N	A	X	L	K	R	D	K	E	V	V	I	S	L	E	L	G	S	E	R	R	G	E	T	T	S	Y	N	V	I	A	E	V	K	G	S	.	.	T	K	A	D	E	I	V	L	I	G	A	H	L	D	S	W	D	E	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T	T																													S	.	.	T																S	S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.
Predicted Secondary structure																																										.																																.	.	.	.
Query SS confidence																																										.																																.	.	.	.
Query Sequence		T	K	D	P	I	Q	P	Y	I	D	G	E	W	V	K	A	R	G	T	T	L	G	A	D	N	G	I	G	M	A	S	A	L	A	V	L	A	D	E	N	.	V	V	H	G	P	L	E	V	L	L	T	M	T	E	E	A	G	M	D	G	A	F	G	L	Q	G	N	W	L	Q	A	.	.	.	.	D	I	L	I
Query Conservation																																										.																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.																																.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	A	I	D	D	G	A	G	V	A	I	V	T	A	A	A	K	H	I	L	D	L	P	Q	K	P	E	R	T	I	R	V	V	L	Y	A	A	E	E	L	G	L	L	G	G	K	T	Y	A	K	E	H	E	A	E	L	E	K	H	Y	I	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	T	T																T	S	S	S			S									S		G	G	G	T	S										T	G	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	D	S	E	E	E	G	E	I	Y	M	G	C	A	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	D	F	G	A	G	P	I	Y	Q	I	D	W	R	V	A
Template Known Secondary structure					S	T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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