Job Description P15288 Confidence 100.00% Date Thu Jan 5 11:34:45 GMT 2012 Rank 13 Aligned Residues 367 % Identity 19% Template c3ic1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase2 from haemophilus influenzae Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	Q	P	L	W	D	I	F	A	K	I	C	S	I	P	H	P	S	Y	H	E	E	Q	L	A	E	Y	I	V	G	W	A	K	E	K	G	F	H	V	E	R	D	Q	V	G	N	I	L	I	R	K	P	A	T	A	G	M	E	N	R	K	P	V	V	L	Q	A	H	L	D	M	V	P	Q	K	N	N	D	T
Query Conservation
Alig confidence																																																										.	.
Template Conservation																																																										.	.
Template Sequence		M	K	E	K	V	V	S	L	A	Q	D	L	I	R	R	P	S	I	S	P	N	D	E	G	C	Q	Q	I	I	A	E	R	L	E	K	L	G	F	Q	I	E	W	M	P	F	N	D	T	L	N	L	W	A	K	H	G	.	.	T	S	E	P	V	I	A	F	A	G	H	T	D	V	V	P	T	G	D	E	N	Q
Template Known Secondary structure															T	S			B	T	T			T	T											T	T	T								B	T	T	B								S	.	.	S	S	S	S										B						G	G	G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		V	H	D	F	T	K	D	P	I	Q	P	Y	I	D	G	E	W	V	K	A	R	G	T	T	L	G	A	D	N	G	I	G	M	A	S	A	L	A	V	L	A	D	E	N	V	V	.	H	G	P	L	E	V	L	L	T	M	T	E	E	A	G	M	D	G	A	F	G	L	Q	G	N	W	L	Q	A	D	I	L	I
Query Conservation																																																.
Alig confidence		.	.	.																																												.																															.	.	.
Template Conservation		.	.	.																																																																											.	.	.
Template Sequence		.	.	.	W	S	S	P	P	F	S	A	E	I	I	D	G	M	L	Y	G	R	G	A	A	D	M	K	G	S	L	A	A	M	I	V	A	A	E	E	Y	V	K	A	N	P	N	H	K	G	T	I	A	L	L	I	T	S	D	E	E	A	T	A	K	D	G	T	I	H	V	V	E	T	L	M	A	R	.	.	.
Template Known Secondary structure		.	.	.		S	S		T	T	T					T	T				S	T	T	T	T	T	T																			T	T		S	S								S		S	S	S			S	S	S											T	.	.	.
Template Predicted Secondary structure		.	.	.																																																																											.	.	.
Template SS confidence
					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	D	S	E	E	E	G	E	I	Y	M	G	C	A	G	G	I	D	F	T	S	N	L	H	L	D	R	E	A	V	P	A	G	F	E	T	F	K	L	T	L	K	G	L	K	G	G	H	S	G	G	E	I	H	V	G	L	G	N	A	N	K	L	L	V	R	F	L	A	G	H	A	E	E	L	D	L	R	L
Query Conservation
Alig confidence		.	.	.																						.	.	.																										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation		.	.	.																						.	.	.																										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		.	.	.	D	E	K	I	T	Y	C	M	V	G	E	P	S	S	A	K	N	L	G	D	V	.	.	.	V	K	N	G	R	R	G	S	I	T	G	N	L	Y	I	Q	G	I	Q	Y	P	H	L	A	E	.	.	.	.	.	.	.	N	P	I	H	K	A	A	L	F	L	Q	E	L	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	T													B	S	S	S	T	T	S		.	.	.																								T	T	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																						.	.	.																										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	F	N	G	G	T	L	R	N	A	I	P	R	E	A	F	A	T	I	A	V	A	A	D	K	V	D	V	L	K	S	L	V	N	T	Y	Q	E	I	L	K	N	E	L	A	E	K	E	K	N	L	A	L	L	L	D	S	V	A	N	D	K	A	A	L	I	A	K	S	R	D	T	F	I	R	L	L	N	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																																216	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		T	P	N	G	V	I	R	N	S	D	V	A	K	G	V	V	E	T	S	L	N	V	G	V	V	T	M	T	D	N	N	V	E	I	H	C	L	I	R	S	L	I	D	S	G	K	D	Y	V	V	S	M	L	D	S	L	G	K	L	A	G	A	K	T	E	A	K	.	G	A	Y	P	G	W	Q	P	D	A	N	S
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		Y	Q	W	D	K	G	N	E	F	F	P	P	T	S	L	Q	I	A	N	I	H	A	G	T	G	S	V	I	P	A	E	L	Y	I	Q	F	N	L	R	Y	C	T	E	V	T	D	E	I	I	K	Q	K	V	A	E	M	L	E	K	H	N	L	K	Y	R	I	E	W	N	L	S	G	K	P	F	L	T	K	P	G
Template Known Secondary structure								B	T	T	B																				S												T	T	S																T	T																		S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	M	H	L	V	R	E	T	Y	Q	R	L	F	N	K	T	P	N	I	Q	I	I	H	A	G	L	E	C	G	L	F	K	K	P	Y	P	E	M	D	M	V	S	I	G	P	T	I	T	G	P	H	S	P	D	E	Q	V	H	I	E	S	V	G	H	Y	W	T	L	L	T	E	L	L	K	E	I	P
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		K	L	L	D	S	I	T	S	A	I	E	E	T	I	G	I	T	P	K	A	E	T	G	G	G	T	S	D	G	R	F	I	A	L	M	.	.	G	A	E	V	V	E	F	G	P	L	N	S	T	I	H	K	V	N	E	C	V	S	V	E	D	L	G	K	C	G	E	I	Y	H	K	M	L	V	N	L	L
Template Known Secondary structure																S										S			S					G	G	G	.	.	T								S	B		T	T	T	T	S	T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.