Job Description P15288 Confidence 100.00% Date Thu Jan 5 11:34:45 GMT 2012 Rank 2 Aligned Residues 467 % Identity 55% Template c2qyvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:xaa-his dipeptidase; PDBTitle: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from2 haemophilus somnus 129pt at 2.11 a resolution Resolution 2.11 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	P	Q	P	L	W	D	I	F	A	K	I	C	S	I	P	H	P	S	Y	H	E	E	Q	L	A	E	Y	I	V	G	W	A	K	E	K	G	F	H	V	E	R	D	Q	V	G	N	I	L	I	R	K	P	A	T	A	G	M	E	N	R	K	P	V	V	L	Q	A	H	L	D	M	V	P	Q	K	N	N	D
Query Conservation
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		L	Q	P	K	L	L	W	Q	W	F	D	Q	I	C	A	I	P	H	P	S	Y	K	E	E	Q	L	A	Q	F	I	I	N	W	A	K	T	K	G	F	F	A	E	R	D	E	V	G	N	V	L	I	R	K	P	A	T	V	G	X	E	N	R	K	P	V	V	L	Q	A	H	L	D	X	V	.	.	.	.	.	.
Template Known Secondary structure				S													S			B	T	T																T	T							T	T											T	T		T	T	B									S		B		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	H	D	F	T	K	D	P	I	Q	P	Y	I	D	G	E	W	V	K	A	R	G	T	T	L	G	A	D	N	G	I	G	M	A	S	A	L	A	V	L	A	D	E	N	V	V	H	G	P	L	E	V	L	L	T	M	T	E	E	A	G	M	D	G	A	F	G	L	Q	G	N	W	L	Q	A	D	I	L	I
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	P	Q	Q	D	P	I	L	P	Y	I	D	G	D	W	V	K	A	K	G	T	T	L	G	A	D	N	G	I	G	X	A	S	A	L	A	V	L	E	S	N	D	I	A	H	P	E	L	E	V	L	L	T	X	T	E	E	R	G	X	E	G	A	I	G	L	R	P	N	W	L	R	S	E	I	L	I
Template Known Secondary structure		.	.	.	.												S	S					T	T	B																				S	S				S	S							S		T	T	T	T						T			S	S					S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		N	T	D	S	E	E	E	G	E	I	Y	M	G	C	A	G	G	I	D	F	T	S	N	L	H	L	D	R	E	A	V	P	A	G	F	E	T	F	K	L	T	L	K	G	L	K	G	G	H	S	G	G	E	I	H	V	G	L	G	N	A	N	K	L	L	V	R	F	L	A	G	H	.	.	.	A	E	E	L	D
Query Conservation																																																																										.	.	.
Alig confidence																												.																																														.	.	.
Template Conservation																												.
Template Sequence		N	T	D	T	E	E	N	G	E	I	Y	I	G	C	A	G	G	E	N	A	D	L	E	L	P	I	.	E	Y	Q	V	N	N	F	E	H	C	Y	Q	V	V	L	K	G	L	R	G	G	H	S	G	V	D	I	H	T	G	R	A	N	A	I	K	V	L	L	R	F	L	A	E	L	Q	Q	N	Q	P	H	F	D
Template Known Secondary structure								T	T																			.								S														B	T	T	T	T	T	T	S	S																				T	T
Template Predicted Secondary structure																												.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	I	D	F	N	G	G	T	L	R	N	A	I	P	R	E	A	F	A	T	I	A	V	A	A	D	K	V	D	V	L	K	S	L	V	N	T	Y	Q	E	I	L	K	N	E	L	A	E	K	E	K	N	L	A	L	L	L	D	S	V	A	N	D	K	A	A	L	I	A	K	S	R	D	T	F	I	R	L
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		F	T	L	A	N	I	R	G	G	S	I	R	N	A	I	P	R	E	S	V	A	T	L	V	F	N	G	D	.	I	T	V	L	Q	S	A	V	Q	K	F	A	D	V	I	K	A	E	L	A	L	T	E	P	N	L	I	F	T	L	E	K	V	E	K	P	Q	Q	V	F	S	S	Q	C	T	K	N	I	I	H	C
Template Known Secondary structure											S		T	T	B													S		.																				T	T	T		T	T												S
Template Predicted Secondary structure																														.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	T	P	N	G	V	I	R	N	S	D	V	A	K	G	V	V	E	T	S	L	N	V	G	V	V	T	M	T	D	N	N	V	E	I	H	C	L	I	R	S	L	I	D	S	G	K	D	Y	V	V	S	M	L	D	S	L	G	K	L	A	G	A	K	T	E	A	K	G	A	Y	P	G	W	Q	P	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	V	L	P	N	G	V	V	R	N	S	D	V	I	E	N	V	V	E	T	S	L	S	I	G	V	L	K	T	E	D	N	F	V	R	S	T	X	L	V	R	S	L	I	E	S	G	K	S	Y	V	A	S	L	L	K	S	L	A	S	L	A	Q	G	N	I	N	L	S	G	D	Y	P	G	W	E	P	Q	S
Template Known Secondary structure														S	S	S	T	T															T	T											S	S																		T	T												B				S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	P	V	M	H	L	V	R	E	T	Y	Q	R	L	F	N	K	T	P	N	I	Q	I	I	H	A	G	L	E	C	G	L	F	K	K	P	Y	P	E	M	D	M	V	S	I	G	P	T	I	T	G	P	H	S	P	D	E	Q	V	H	I	E	S	V	G	H	Y	W	T	L	L	T	E	L	L	K	E	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	D	I	L	D	L	T	K	T	I	Y	A	Q	V	L	G	T	D	P	E	I	K	V	I	H	A	G	L	E	C	G	L	L	K	K	I	Y	P	T	I	D	X	V	S	I	G	P	T	I	R	N	A	H	S	P	D	E	K	V	H	I	P	A	V	E	T	Y	W	K	V	L	T	G	I	L	A	H	I	P
Template Known Secondary structure																		S	S								S	S			T									T	T	S											S	T	T	S	T	T																					T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		484	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		485	.