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Job DescriptionP15288
Confidence100.00%DateThu Jan 5 11:34:45 GMT 2012
Rank31Aligned Residues323
% Identity18%Templatec2pe3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30 .........40.........50.........60.........70.........80.........90.
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Query Sequence  WDIFAKICSIPHPSYHEE. QLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDF
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Template Sequence  WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGS. . . . . SPRIMVAAHMDKIGVM. . . . . . . .
Template Known Secondary structure  S

BTT
GGGTTT
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B
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   12.......20.........30.........40.........50.........60.. .......70........
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  TKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSE
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Template Sequence  . . . . VNHIDKDGYLHIVPI. GGVLPETLVAQRIRFFTEKGERYGVVGVLPDWDQIVVDVGASSKEEAEEMG. . . . . . . . .
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   7980.........90... ......100.........110.........120.........130.........140....
 
   172.......180.........190.........200.........210.........220.........230.........240.........250.
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Query Sequence  EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . FRVGTVGEFAPNFTRLN. EHRFATPYLD. . DRICLYAMIEAARQLGDHEADIYIVGSV
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   159160.........170..... ....180..... ....190.........200.........210...
 
   252.......260.........270.........280.........290.........300.........310.........320.........330.
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Query Sequence  GTLRNAIPREAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGV
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Template Sequence  QEEVGLRGARV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
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   214.....220....
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  IRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLV
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Template Sequence  . . . . . . . . . . . . . . . . . ASYAINPEVGIAMDVTFAKQPHDKGKIVPELGK. . . . . . . . . . . . GPVMDVGPNINPKLRAFA
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S


TT
TT




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   225....230.........240.........250....... ..260.........270.....
 
   412...... .420.........430.........440.........450.........460.........470.........480.....
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Query Sequence  RETYQRL. FNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK
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Template Sequence  DEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPM
Template Known Secondary structure  T




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SSTTSTT

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   276...280.........290.........300.........310.........320.........330.........340.........350
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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