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Job DescriptionP15288
Confidence99.94%DateThu Jan 5 11:34:45 GMT 2012
Rank50Aligned Residues232
% Identity25%Templatec2greC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVP. . . . . . . .
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Template Sequence  KETXELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGK. . . NDAQHRLLTAHVDTLGAXVKEIKP
Template Known Secondary structure  TS

BTT

TSSSSS
SSS


S...

B

T
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   6...10.........20.........30.........40.........50........ .60.........70.........80..
 
   82.......90.........100....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QKNNDTVHDFTKDPIQPYIDGEW
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Template Sequence  DGRLSLSXIGGFRWNSVEGEYCEIETSSGKTYTGTILXIEVRIDERVFSADEVRELGIEVGDF. . . VSFDPRVQITESGY
Template Known Secondary structure  TS
SS

GGGGTT

TTS


SS


STT

TT
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TTS
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   83......90.........100.........110.........120.........130.........140..... ....150.........
 
   105....110.........120.........130. ........140.........150.........160.........170.........180
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Query Sequence  VKARGTTLGADNGIGMASALAVLADEN. . . . VVHGPLEVLLTMTEEAGMDGAFGLQGNWLQADILINTDSEEEGEIYMGC
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Template Sequence  IKSRHL. . . . DDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNENIPEETVE. . . . . . . . . . . YLAVDXGALGDGSDEY
Template Known Secondary structure  S

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SS




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S



TT
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   180..... ....190.........200.........210.........220........ .230.........240....
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  AGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPR
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Template Sequence  TV. . . . . . . . . . . . . . . . . . . . . . SICAKDSSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S......................TT...............................................
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   255. ...260.....
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  EAFATIAVAADKVDVLKSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  VVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PYHYALRKHLVELAKTN. H
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T.T
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   266...270.........280.. .
 
   421........430.........440.........450.........460.........470.........480.
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Query Sequence  KTPNIQIIHAGLECGLFKKPYPEMDMVSIGPTITGPHSPDEQVHIESVGHYWTLLTELLKE
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Template Sequence  IEYKVDIYPYYRAGF. . . . . . . DVKHALIGAGIDSSHAF. ERTHESSIAHTEALVYAYVXS
Template Known Secondary structure 

TT


SS.......SS

SS
SSS.TS
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   284.....290........ .300.........310..... ....320.........330......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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