Job Description P15288 Confidence 98.15% Date Thu Jan 5 11:34:45 GMT 2012 Rank 80 Aligned Residues 89 % Identity 17% Template c1cx8F_ PDB info PDB header:metal transport Chain: F: PDB Molecule:transferrin receptor protein; PDBTitle: crytal structure of the ectodomain of human transferrin receptor Resolution 3.20 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	R	D	Q	V	G	N	I	L	I	R	K	P	A	T	A	G	M	E	N	R	K	P	V	V	L	Q	A	H	L	D	M	V	P	Q	K	N	N	D	T	V	H	D	F	T	K	D	P	I	Q	P	Y	I	D	G	E	W	V	K	A	R	G	T	T	L	G	A	D	N	G	I	G	M	A	S	A	L	A
Query Conservation
Alig confidence																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	K	E	I	K	I	L	N	I	F	G	V	I	K	G	F	.	.	V	E	P	D	H	Y	V	V	V	G	A	Q	R	D	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	G	A	A	K	S	G	V	G	T	A	L	L	L	K	L	A	Q
Template Known Secondary structure																		S	.	.	S															S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	T	T
Template Predicted Secondary structure																			.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.																											.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		126	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		V	L	A	D	.	.	.	.	.	E	N	V	V	H	G	P	L	E	V	L	L	T	M	T	E	E	A	G	M	D	G	A	F	G	L	Q	G	N	W	L	Q	A
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.
Template Conservation
Template Sequence		M	F	S	D	M	V	L	K	D	G	F	Q	P	S	R	S	I	I	F	A	S	W	S	A	G	D	F	G	S	V	G	A	T	E	W	L	E	G	Y	L	S	S
Template Known Secondary structure									T	S					S							B			S	G	G	G	T	S								G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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